Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nenu1g00697 | ATGGCTTCCGCAATTGCATTAAGGAGAGCCGCTACTCCAAGCCTCCTCAACAAGTTCCTCAACCCAGTCCGTTCTGTCACGGTTGTTCCACCCGCAGTGCGCTCCTTCAATACTAAGGCTCAGATGCTTGACTATGATGATGACGAGCATGGTGTTGATGTCAGTCGCCGCTCCGACCAGCCTGTCTCTCGCCGTCGTGATTACGTTCCTAATCTCTTCTCAGACGTGCTCGATCCTTTCTCTTCAACAAAGAGCTTGAGCCAGGTGCTTAATCTGATGGACCAGTTCATGGAGAACCCATTCCTGGCTGCATCGAGGGGGATGGGAGCTGGAACGAGGAGAGGATGGGACGTGAAGGAAGATGAGAATGCTCTGTATCTGAGGATGGACATGCCAGGGCTGGGGAAGGAAAACGTGAAGGTGTCTGTGGAGCAGAACACTCTGATCATCAAGGGAGAAGGGGAAAAAGAATCTGACGAGGAGAAGAGCGGGCGAAGGTACAGTAGCAGGATCGATCTGCCTGAGAAGCTGTACAAGATTGATCAGATTAAGGCGGAGATGAAGAATGGTGTTCTCAAGGTTATTGTTCCGAAGGTGAAGGAAGAGGAGAGGAAGGTCGTCTTGCAAGTTAAGATCGACTAA | 642 | 50.93 | MASAIALRRAATPSLLNKFLNPVRSVTVVPPAVRSFNTKAQMLDYDDDEHGVDVSRRSDQPVSRRRDYVPNLFSDVLDPFSSTKSLSQVLNLMDQFMENPFLAASRGMGAGTRRGWDVKEDENALYLRMDMPGLGKENVKVSVEQNTLIIKGEGEKESDEEKSGRRYSSRIDLPEKLYKIDQIKAEMKNGVLKVIVPKVKEEERKVVLQVKID | 213 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nenu1g00697 | 213 | CDD | ACD-sHsps-like | 117 | 198 | - | - | |
| Nenu1g00697 | 213 | PANTHER | 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL | 1 | 204 | IPR044656 | - | |
| Nenu1g00697 | 213 | Pfam | Hsp20-alpha crystallin family | 117 | 212 | IPR002068 | - | |
| Nenu1g00697 | 213 | Gene3D | - | 72 | 212 | IPR008978 | - | |
| Nenu1g00697 | 213 | ProSiteProfiles | Small heat shock protein (sHSP) domain profile. | 107 | 213 | IPR002068 | - | |
| Nenu1g00697 | 213 | SUPERFAMILY | HSP20-like chaperones | 87 | 206 | IPR008978 | - | |
| Nenu1g00697 | 213 | FunFam | 23.6 kDa heat shock protein mitochondrial | 67 | 212 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nenu1g00697 | K13993 | HSP20 family protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nenu | Nenu-Chr1:19459126 | Nenu1g05954 | Nenu-Chr1:179009131 | dispersed | |
| Nenu | Nenu-Chr1:1660878 | Nenu1g00697 | Nenu-Chr1:19459126 | transposed | |
| Nenu | Nenu-Chr1:132735420 | Nenu1g00697 | Nenu-Chr1:19459126 | transposed | |
| Nenu | Nenu-Chr3:102399407 | Nenu1g00697 | Nenu-Chr1:19459126 | transposed | |
| Nenu | Nenu-Chr4:15037235 | Nenu1g00697 | Nenu-Chr1:19459126 | transposed | |
| Nenu | Nenu-Chr8:14909082 | Nenu1g00697 | Nenu-Chr1:19459126 | transposed | |
| Nenu | Nenu-Chr1:19459126 | Nenu6g01155 | Nenu-Chr6:39252389 | wgd |