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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu1g00704 ATGGGTATAATCAGGAGCAGTTTCTCATTCATGCTAGGGACGTTGTGTGGAGTATACGTTGCTCAGAACTACAACGTTCCCAACATAAAGAAGCTCGCTAGTACAGGGCTTTTGATAGCCAAACACATCGAGGAAACGTACCGGAAGCCGAAGAAGAGAGACGACGACGACTAG 174 47.13 MGIIRSSFSFMLGTLCGVYVAQNYNVPNIKKLASTGLLIAKHIEETYRKPKKRDDDD 57
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu1g00704 57 PANTHER OS07G0239500 PROTEIN 1 57 - -
Nenu1g00704 57 Pfam Domain of unknown function (DUF4535) 6 50 IPR027854 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu1g00704 K27319 short transmembrane mitochondrial protein 1
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:19608811 Nenu6g01160 Nenu-Chr6:39343491 dispersed
Nenu Nenu-Chr1:19608811 Nenu6g01159 Nenu-Chr6:39328936 wgd