AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu1g00725 ATGGGGCTTGAAGTACTGTTGGAAAGATCCTGGCAAAACACGGTTATATTAAACAATGCAAGGTCTGATATAAGAGTTGGCACTCTGTTTGATTTTCATGAGAACGGAATGTTGACAGGAGGTGATTTTAATCTTAATTCCACCCAAAAATATTCGGATTCTCTCAAGGAATTTCTAAAGCAGACAATGCTCCACCATGAGGCAATATTTAAGAACCAGGTCCACGAACTCCATCGTCTATACAGGATTCAGAAAACCTTGATGAAGGATATTAGCTGGAGGGACCTTGATGGATATAATTCATGGACAGCAAACACACAACCAGTCCAGTTACCATTTCAAGATTTACCAGCACAAAGACCATTGGTAGAAGAGAGAACCTTTTCTGCACCTCCCATGGTGAGCCCTAAACTGATTGCAAACCAGGATATGTTGGAGCAGCAAAGCACCTACACTAAACTTCAGCACGGACCTGTTGACCTTCAACTCCCAGCCGACGAATACATTAGTCATGTAGGCAACGGACTTCCTAGGAAAATGAATTTATGGCCATCCCTTGGAGAATCCACTGAAGCAATGGATTTTTTTCATAGTAGTTATTCTTCTGATCCAGAGGTGGTAAAGCTTTCCCTGAATGGTGGAGAGGGCCAAAGTAAGGAGATTTCCAATAGAAAATTTGTCATTGATTTGGAAGAATCAACTGAAATGTTATCAGACAAGGAGCTAAAACCATTACGTTTCCTTGTATCTGAAGCTCCAAATTCCGTAGATAAGCATGAGGCCCAAGTTTCTGTTCTAGCTGAGCCAAGCTTTTCACTTAGAACAAAGAAAGATGTAGGTCATGGGCTTTCCGTAAATTGCTCTGTTGCAAATTGCACTGAGGATAGTGAAGAGCAGAAATCCTTGTTCATGGATACTGGATTGAATGGAAGTCATTCCAGTAGTCCATTTACCAGGCTGTTCGCCAACAAGCAACAATCATCTTCAGACAGCACTGCACATTTGGATCTTAATGCAGTTCAGCTTGATGAGTCTTCTTGTTTGTCAAATGATCCTGCAGTATCTGTTCCTTCTCTTACAGCAAGACCACAAGATGTTTTCCAGGGATGCAGTGATGCATCCTACAAAGGAACTCAGCCTATCACTTGTTGGAAACTTCAGAACTATCACACAAGTGGAACTTCTTATGTGTTTGAGAAAGAGAATTCTACTTATTCAGGTTTGATAGATTCTAAGGGAAAAGATTGTAGCAATCAAGCTTGTGATGAAAATGACAAGCTCAAGTCAAGCTGTGGAATTAAGAGAGTTGCTATTGATCTAGAGTCTCTGCCTGAGGATGCTTTAGATGCATGTGAAAACTTGAGCAACAACACTGGTAAGTCCTCCAGAGAAAATGTGGACTTGTTGCTGGGACTGCCTAATGGTTTTCAATATGATAATCAAACGGGTTCTTCAACCACTCCTTTCTCTAAGCTAGTAGAAAATCATCCCTATGTATCAAGTAATTTGGGTTTACCCCTAGCAGCAGGAGAAGTAAGAGTTGGCCCAGTAAACTTTGACAAGAGTGAGGAAGATACAGTATCTTCAAGTCCTTGTAAAAGTCAGGTCGTGATTCAAGATGGACATTTTGGAGCATCTAATGCTGCAGGCAAGTCCAATTATGAGACTGACAACAACTCTAGCAGTGTAAAGGACTTGCAATCTGGAACAGAGGATAAACACCAGTTAGAGGTTTCAAATCTTTCTGCCTTTGAGGAGTCTGGAACTACTCAACTAGGATCTCAAATTGCAGAGGCTCTCTCTTGCGAGCAGGAACTGAATGTGGAAACTGGTATTTATGCTTGCATGCAGGGTAAATGTTGTGATGGCACTGAACCAGAATATCAATATGGTAGTGAGCAGGAAAAGGACAGAGAAATGGATACTTTGGTCCAAATAGCTGCAGAGTCCCTTATCCAGTTTTCTATGGAAAATTCACTATGTTCTCAAGATGGGTTTGCAAAGGCAGCAGAATCAGATGAATTGTTAAACGAGGAGAAAGCGGAACAGCCAGAGTATTCTTCTGATTCCTTTGAATCAATCACATTGAGATTAACAGAAAGCAGTATAGATGATTACTCAGTGTCATCAGCGCCGGTAGAGGTAAATGAAATAGGAAATAAGCCATGTGGGTGGAACTTGAAGAGGGGGAGGAGAATGAAAGATTTCCAGAGAGAGATACTGCCTGGTCTTGCATCTCTTTCCAGACATGAAATCTGGGAAGATATAAATATTATAGGAGCGGTTATCAAGTCAAAGGAATATAAGAACAGATCCAGGAAAGTGGTGGTCGGGGATAACTGGTGTGCCCCTGTAAGAAGCAGAAGGTCGAAACTAAATTATGTTGGCCGAAGGAATTATTCATGA 2406 41.27 MGLEVLLERSWQNTVILNNARSDIRVGTLFDFHENGMLTGGDFNLNSTQKYSDSLKEFLKQTMLHHEAIFKNQVHELHRLYRIQKTLMKDISWRDLDGYNSWTANTQPVQLPFQDLPAQRPLVEERTFSAPPMVSPKLIANQDMLEQQSTYTKLQHGPVDLQLPADEYISHVGNGLPRKMNLWPSLGESTEAMDFFHSSYSSDPEVVKLSLNGGEGQSKEISNRKFVIDLEESTEMLSDKELKPLRFLVSEAPNSVDKHEAQVSVLAEPSFSLRTKKDVGHGLSVNCSVANCTEDSEEQKSLFMDTGLNGSHSSSPFTRLFANKQQSSSDSTAHLDLNAVQLDESSCLSNDPAVSVPSLTARPQDVFQGCSDASYKGTQPITCWKLQNYHTSGTSYVFEKENSTYSGLIDSKGKDCSNQACDENDKLKSSCGIKRVAIDLESLPEDALDACENLSNNTGKSSRENVDLLLGLPNGFQYDNQTGSSTTPFSKLVENHPYVSSNLGLPLAAGEVRVGPVNFDKSEEDTVSSSPCKSQVVIQDGHFGASNAAGKSNYETDNNSSSVKDLQSGTEDKHQLEVSNLSAFEESGTTQLGSQIAEALSCEQELNVETGIYACMQGKCCDGTEPEYQYGSEQEKDREMDTLVQIAAESLIQFSMENSLCSQDGFAKAAESDELLNEEKAEQPEYSSDSFESITLRLTESSIDDYSVSSAPVEVNEIGNKPCGWNLKRGRRMKDFQREILPGLASLSRHEIWEDINIIGAVIKSKEYKNRSRKVVVGDNWCAPVRSRRSKLNYVGRRNYS 801
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu1g00725 801 MobiDBLite consensus disorder prediction 549 566 - -
Nenu1g00725 801 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 37 793 - -
Nenu1g00725 801 MobiDBLite consensus disorder prediction 546 572 - -
Nenu1g00725 801 Pfam Plant protein of unknown function (DUF863) 632 764 IPR008581 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu1g00725 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:20179513 Nenu3g03176 Nenu-Chr3:91584749 dispersed
Nenu Nenu-Chr1:20179513 Nenu6g01190 Nenu-Chr6:39844297 wgd