Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nenu1g00727 | ATGGTGGGTATTTCTTGTCTTCCTCACTGGCTTCAGGCCCTTCTCGGGGAGAAGTTCTTTAATCAGTGTTTGATTCATGAGTCTGCGAGGAAAAACGAGAAGAACATATTTTGCTTGGATTGTTGCACTAGTATTTGTCCACACTGCTTATCTCCTCATCGTTCTCATCGGCTCTTACAGATAAGAAGATACGTCTATCATGACGTTATACGGCTGGATGACATTGAAAAATTAATCGATTGCGCCTTTGTTCAATCTTACACGACCAACAGTGCAAAGGTGGTATTTTTAAACCAGAGGCCACAGTCTCGACCTTTTAGAGGCTCCGGTAGCATATGCAGCACCTGCGACAGGAGCCTTCAAGACCCATATCTCTTCTGTTCTCTCTCCTGCAAGGTTCATCATCTGGCCAGGAACGAAGGTGGATTATCGAAATACCTTTACGAGTGTGAATACCTTCCATTACCAGAAGGAGGAAAAGGAGAGAACTTTTGCGAAGTACTGGACGAAGGGCAAATGACGCCCGACTCGGTCCTCGAACCGCCGGGTTTGTTGCGCACCTCGTCCGGGTCGAGCGCAAGTGGTGGCGGCGTGGGTTGCAGGAACCTTGCCTGCACTGCTACCACGGATTTTGTGAAGAAGAAACGCAGCGGCGTTTCAGTTTCACGGGCAACTTATCGGCCGACATGCTCACGCGCGTCGGAAATCTCCATGAGTAACAGGCGAAAGAGTATGCCACACCGCTCTCCACTTTATTAA | 759 | 48.75 | MVGISCLPHWLQALLGEKFFNQCLIHESARKNEKNIFCLDCCTSICPHCLSPHRSHRLLQIRRYVYHDVIRLDDIEKLIDCAFVQSYTTNSAKVVFLNQRPQSRPFRGSGSICSTCDRSLQDPYLFCSLSCKVHHLARNEGGLSKYLYECEYLPLPEGGKGENFCEVLDEGQMTPDSVLEPPGLLRTSSGSSASGGGVGCRNLACTATTDFVKKKRSGVSVSRATYRPTCSRASEISMSNRRKSMPHRSPLY | 252 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nenu1g00727 | 252 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 8 | 251 | - | - | |
| Nenu1g00727 | 252 | Pfam | PLATZ transcription factor | 62 | 133 | IPR006734 | - | |
| Nenu1g00727 | 252 | ProSiteProfiles | Zinc finger B-box type profile. | 23 | 61 | IPR000315 | GO:0008270(InterPro) | |
| Nenu1g00727 | 252 | SUPERFAMILY | B-box zinc-binding domain | 21 | 65 | - | - | |
| Nenu1g00727 | 252 | MobiDBLite | consensus disorder prediction | 232 | 252 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nenu1g00727 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nenu | Nenu-Chr1:20272466 | Nenu1g03625 | Nenu-Chr1:100087391 | dispersed | |
| Nenu | Nenu-Chr7:54846919 | Nenu1g00727 | Nenu-Chr1:20272466 | transposed | |
| Nenu | Nenu-Chr1:20272466 | Nenu6g01193 | Nenu-Chr6:39920385 | wgd |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Nenu | PLATZ | 3.2e-27 | No_clan | TF | PLATZ |