AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu1g00734 ATGTTTCAGAAGTTCGCTTTGGCCTTCAAGACCAAAACCCTCGAATTCTTTGCCGAACAAGAAGATGATGATGATGATGCCGACCCCATCTCCCTTCTCGACTCCACTGAACAAGTCATCACCGACCAGCGGGTCGTCGTCATCAAACCCGACCAACTCATCAAACCAACTCCATCCTCCCAAGTACACTCCCAACAGCTACTACAAAAAGAGCGAGATCGTTACCACCCCAACCATCTGCAAATTCTCCAATCCTTAACCTCCTCCCTCTTCGCCACTATTTCCTCCTTCGAGGCTTCTTACTTGCAACTACAGACTGCTCATGCTCCTTTTGATGCCGAAAAGATAAAGGCGGCCGATCAAGCTGCGGTCTCCCACCTCCAGAGGCTATCTGAGATCAAACAATCTTATAGAAATTTCCGCAACAACTCTACCGTAGCCCCTAGTTTCCCTTTAGCCTTGTCTCACTTGGAAGCTCAGGTACAGGAGAACCAGACCATGCTCCGTACTTTGGAGATGGTTGTCAACAGGTTGCAGTCCGATATCGATCTCAAAGATGCTGAGGTTTCCATGATGAAGCAGAAATTGGGAGAAATTCAGAATTTCAATCTCAGGTTATCTAATTCCAACTCCACTTCGACTTCGAATCTTGCTGCTTCTCTATCGTCAACGTCGTCTTCTTCTTCTTCTCCATCGTCCACGTCGTCTATTCTAATGTCTCCTCGAGTTTTCTATTCTGTGTTACAGGACACTTGCAGAGCAATGCATATTTTTACTAATCTCTTGATTGATTTAATGAAGAAAGCTGGGTGGGATTTAGAGTTGGCTGCGAATTCTGTTCAACCGGACATTGATTATGTGAAGAGAAGGCATAACCGGTATGCATTTTTGTCCTACGTTTGTTTAGGAATGTTTGATGGTTTCCATTTGGAAGATTTTGGTTTGGGAGGAGACGAAAGTGAGTGCAATGGTGTCGATTTGAGTGTTCGGAGGAAGAATTCTTTAAGGCAATTTGTCGAGCAAGGTGCGGGTAACGAAATGGAGCTTCTAAATAGGAATTCAAGATGTGATTTCGCCAGATTTTGTGAGAATAAGTACCAGAAGCTCATTCACCCCACCATGGAATCCTCCCTTTTTAGAAACTTGGAAAAGAACGAACTTGTGTTGAGTTCTTGGAGGTCTTCCACCGCTTTCTACAACTTGTTTGTAAAAATGTCTAGTTCTCTATGGATGTTGCATAATTTGGCATTCTCTTTTGATCCACCAGTTGAGATATTTCAGGTGGAGAGAGGGGTCAATTTTTCAATGGTTTACATGGAAAATGTAACGCAAAGAGGTGCATTATGGGATAAAACCAAAGCCAAGGTGGGTTTCACAGTTATTCCAGGATTTAGAATTGGGAGGACGGTCATTCAGTCTCAGGTGTATCTAACTGGTATCGAGTGTTCGGACTGA 1455 43.85 MFQKFALAFKTKTLEFFAEQEDDDDDADPISLLDSTEQVITDQRVVVIKPDQLIKPTPSSQVHSQQLLQKERDRYHPNHLQILQSLTSSLFATISSFEASYLQLQTAHAPFDAEKIKAADQAAVSHLQRLSEIKQSYRNFRNNSTVAPSFPLALSHLEAQVQENQTMLRTLEMVVNRLQSDIDLKDAEVSMMKQKLGEIQNFNLRLSNSNSTSTSNLAASLSSTSSSSSSPSSTSSILMSPRVFYSVLQDTCRAMHIFTNLLIDLMKKAGWDLELAANSVQPDIDYVKRRHNRYAFLSYVCLGMFDGFHLEDFGLGGDESECNGVDLSVRRKNSLRQFVEQGAGNEMELLNRNSRCDFARFCENKYQKLIHPTMESSLFRNLEKNELVLSSWRSSTAFYNLFVKMSSSLWMLHNLAFSFDPPVEIFQVERGVNFSMVYMENVTQRGALWDKTKAKVGFTVIPGFRIGRTVIQSQVYLTGIECSD 484
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu1g00734 484 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 1 477 IPR040225 GO:0009639(InterPro)|GO:0009959(InterPro)
Nenu1g00734 484 MobiDBLite consensus disorder prediction 217 236 - -
Nenu1g00734 484 Pfam Plant protein of unknown function (DUF641) 81 207 IPR006943 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu1g00734 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:20523238 Nenu1g00759 Nenu-Chr1:21075171 dispersed
Nenu Nenu-Chr1:20523238 Nenu6g01203 Nenu-Chr6:40190763 wgd