Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nenu1g00736 | ATGCGAATGACGGATCTAAATCTAGAGTTGCAGGAGGCAGGTTGGGAGGAATTGAGGAAAGAGGCCAGAAAGATTGAGGGTGATCTTGATGTCAAGCTCTCTTCCTATGCTAAGCTCGGAGCAAGGTTTACCCAAGGAGGCTATGCAGATACTGGGTCACCAACTCTTGGGTCCAGCAGATCCTGGAAGTCTATGGAAATGGAGATTCAATCTTTGCTTGAAAAGCTACTTGATACCAATGATGCCATGAGCCGATGTGCAGCATCTGCAGCACCTACTACCTCTGTAACACAGAAACTAGCAAGGCACAGAGATATACTTCATGAGTTTACTCAGGAATTTAGACGAATCAAGGGAAATATAAACTCCATGAGGGAGCATGCTGAGCTTCTAAGTTCTGTGAAGGATGATATAAGTGAACATAAGATGTCTGGGAGTATCTCACCAAGAGCAAATTTATTAAGAGAGAGAGCTACTATACATGGAAGTATAGCTCATATTGATGATGTGATAAATCAAGCTCAAGCTACTAGGTCAGTTTTGGGCTCCCAACGATCTTTACTTGGAGATGTTCAAGGGAAAGTCAAGCAACTAAGTGACAAGTTCCCCGTCATCCGTGGCCTTCTTGGTGCCATTAAGAGGAAGCGATCTAGAGATACTCTCATTCTCTCTGCTGTCATTGCAGGTTGCACATTGTTCCTGATTATATACTGGCTCTCCAAATAA | 726 | 43.53 | MRMTDLNLELQEAGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYADTGSPTLGSSRSWKSMEMEIQSLLEKLLDTNDAMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLSSVKDDISEHKMSGSISPRANLLRERATIHGSIAHIDDVINQAQATRSVLGSQRSLLGDVQGKVKQLSDKFPVIRGLLGAIKRKRSRDTLILSAVIAGCTLFLIIYWLSK | 241 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nenu1g00736 | 241 | Pfam | Snare region anchored in the vesicle membrane C-terminus | 153 | 216 | - | - | |
| Nenu1g00736 | 241 | PIRSF | Golgi-SNARE | 3 | 240 | IPR023601 | GO:0000139(InterPro)|GO:0005801(InterPro)|GO:0006888(InterPro)|GO:0016020(InterPro) | |
| Nenu1g00736 | 241 | PANTHER | GOS-28 SNARE- RELATED | 11 | 241 | IPR023601 | GO:0000139(InterPro)|GO:0000139(PANTHER)|GO:0005484(PANTHER)|GO:0005797(PANTHER)|GO:0005801(InterPro)|GO:0006888(InterPro)|GO:0006888(PANTHER)|GO:0006906(PANTHER)|GO:0016020(InterPro)|GO:0031201(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nenu1g00736 | K08495 | golgi SNAP receptor complex member 1 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nenu | Nenu-Chr1:20581474 | Nenu2g01419 | Nenu-Chr2:29936003 | dispersed | |
| Nenu | Nenu-Chr1:20581474 | Nenu6g01206 | Nenu-Chr6:40247029 | wgd |