AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nenu2g03099 | ATGACTGCTCAGACGCAAGATGAGCTTCTCGCTGCTCATCTCGAACAGCAAAAGATCGATCCTGATGAGCCTGTGGTTGAAGATGAAGACGAAGATGATGATGATGATGAAGATGACGATGACAAGGATGAAGATGATGCAGAAGGACAGCAAGAAGGAGATGCAAGCGGTAGGTCAAAGCAGAGTAGGAGTGAGAAGAAGAGTCGCAAGGCAATGGTGAAGCTCGGAATGAAGCCCATCCCAGGTGTCAGCCGTGTTACTGTCAAAAAGAGCAAGAATATTTTATTTGTCATCTCAAAACCAGATGTTTTAAGAGCCCGACTTCAGACACCTATGTTGTTTTGGGAGGCAAAGATTGAAGACCTGAGCTCCCAATTGCAGACTCAGGCTGCGGAGCAGTTCAAGGCCCCTGATCTCAGCCATGTAATCTCCAAGCCTGAATCATCCGCCATGGCTCAGGAGGATGAAGAGGTGGACGAGACAGGTGTAGAACCCAAGGACATAGAGTTGGTAATGACACAGGCTGGAGTCTCAAGGGCGAAGGCCGTGAAGGCACTAAAGGCGGCTGATGGAGACATTGTCTCTGCCATCATGGAGTTAACAAACTAA | 609 | 48.44 | MTAQTQDELLAAHLEQQKIDPDEPVVEDEDEDDDDDEDDDDKDEDDAEGQQEGDASGRSKQSRSEKKSRKAMVKLGMKPIPGVSRVTVKKSKNILFVISKPDVLRARLQTPMLFWEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPESSAMAQEDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELTN | 202 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nenu2g03099 | 202 | ProSiteProfiles | NAC A-B domain profile. | 62 | 126 | IPR002715 | - | |
| Nenu2g03099 | 202 | MobiDBLite | consensus disorder prediction | 1 | 74 | - | - | |
| Nenu2g03099 | 202 | CDD | NAC-NACA | 76 | 122 | - | - | |
| Nenu2g03099 | 202 | FunFam | Putative nascent polypeptide-associated complex subunit alpha | 163 | 200 | - | - | |
| Nenu2g03099 | 202 | Gene3D | - | 71 | 123 | IPR038187 | - | |
| Nenu2g03099 | 202 | Pfam | HYPK UBA domain | 162 | 201 | IPR044034 | - | |
| Nenu2g03099 | 202 | MobiDBLite | consensus disorder prediction | 22 | 50 | - | - | |
| Nenu2g03099 | 202 | Pfam | NAC domain | 65 | 106 | IPR002715 | - | |
| Nenu2g03099 | 202 | SMART | NAC-2 | 65 | 120 | IPR002715 | - | |
| Nenu2g03099 | 202 | PANTHER | NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED | 11 | 201 | IPR016641 | GO:0005737(PANTHER)|GO:0005854(InterPro)|GO:0006612(PANTHER)|GO:0051082(PANTHER) | |
| Nenu2g03099 | 202 | Gene3D | - | 163 | 200 | - | - | |
| Nenu2g03099 | 202 | MobiDBLite | consensus disorder prediction | 58 | 72 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nenu2g03099 | K03626 | nascent polypeptide-associated complex subunit alpha |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nenu | Nenu-Chr2:73017410 | Nenu3g02183 | Nenu-Chr3:71528694 | dispersed | |
| Nenu | Nenu-Chr2:73017410 | Nenu7g00909 | Nenu-Chr7:19855904 | wgd |