AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu2g03915 ATGGCTACACGGTCATACGACCGATGCATCACTAGTGTGGGCCCCGATGTAAGATCGCCCATGGAAGTAACAGAAAAAATAGAAGAAGAGGACGAGGAAGAGATGGGTTGGAGCAGAGATACGGTCCCTCGTGTGCTGCAGATAGTGAGCACGAGACTTCCTCAGAGAGACCTTATCTCTCTCTTACCGGTCAGCCCGTGGTTGTACCGTACACTTTCCTCCTACCATTCTCTCTGGAAGGTTCTTGATTTGCATGAGATGAACAATGCTGGTGAACGGCTGATTGCTGCTCTTTCACTGCCCAGATACCAACATATTAAGCAGATAAACCTTGAGTTTGCACAAGATATTGAAGACAAACATCTCATTCAACTTAAGGGCAAGTGCATGGAGGCACTTCAAGATTTGGAATCTCTAAATCTTAATGGCTGCCAGAAGATCTCTGATAAGGGATTTGAAGCTGTAACTAGTGCTTGCCTTAAACTCAAGGTGTTATCCATCTATTGGAATGTGAGGGTGTCAGATTTAGGCATAAAGCATATGGTGGATCACTGCAAATATATAGTTGATTTAAACTTGAGTGGTTGTAAGAATATCACAGACAAAAGCTTGCACCTAATTGCCGATAATTACCAAGAGCTGGAGTTTTTGAATCTCACCAGGTGTGTTAAGGTAACAGATGGTGGATTGCAACAAGTATTGCTTAAGTGTTGCTTGTTACGAAGTCTCAACCTTTATGCACTCTCAAGCTTCACTGATGAAGCTTACAAGAAGATTGCAGTTTTAGCTCATCTGAGGTTCTTAGATCTCTGTGGTGCACAGAATCTTTCCGATCAAGGCCTTTCCTGTATAGCCAAGTGCAAGAATCTGGTGTCTCTGAACTTGACATGGTGTGTTCAAATCACTGATGTGGGAGTGATAGCCATTGCAGAAGGTTGCTGCTCTCTTGAATTTCTAAGCTTGTTTGGAATCGTTGGAGTGACAGATAGGTGCCTGGAGGTCCTGTCAAGGTTCTGCTCAAATACACTAGCAACCCTTGATGTTAATGGATGTATTGGCATTAAGAGACGGAGCCGTGATGAATTGCTACAATTGTTCCCACATCTGAGGTGCTTCAAAGTGCATAGCTAG 1131 43.59 MATRSYDRCITSVGPDVRSPMEVTEKIEEEDEEEMGWSRDTVPRVLQIVSTRLPQRDLISLLPVSPWLYRTLSSYHSLWKVLDLHEMNNAGERLIAALSLPRYQHIKQINLEFAQDIEDKHLIQLKGKCMEALQDLESLNLNGCQKISDKGFEAVTSACLKLKVLSIYWNVRVSDLGIKHMVDHCKYIVDLNLSGCKNITDKSLHLIADNYQELEFLNLTRCVKVTDGGLQQVLLKCCLLRSLNLYALSSFTDEAYKKIAVLAHLRFLDLCGAQNLSDQGLSCIAKCKNLVSLNLTWCVQITDVGVIAIAEGCCSLEFLSLFGIVGVTDRCLEVLSRFCSNTLATLDVNGCIGIKRRSRDELLQLFPHLRCFKVHS 376
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu2g03915 376 SUPERFAMILY RNI-like 100 366 - -
Nenu2g03915 376 Gene3D Ribonuclease Inhibitor 173 255 IPR032675 -
Nenu2g03915 376 Gene3D Ribonuclease Inhibitor 73 172 IPR032675 -
Nenu2g03915 376 PANTHER UNCHARACTERIZED 199 371 - GO:0019005(PANTHER)|GO:0031146(PANTHER)
Nenu2g03915 376 SMART LRR-CC-2 211 236 IPR006553 -
Nenu2g03915 376 SMART LRR-CC-2 133 158 IPR006553 -
Nenu2g03915 376 SMART LRR-CC-2 185 210 IPR006553 -
Nenu2g03915 376 SMART LRR-CC-2 159 184 IPR006553 -
Nenu2g03915 376 SMART LRR-CC-2 287 312 IPR006553 -
Nenu2g03915 376 SMART LRR-CC-2 237 262 IPR006553 -
Nenu2g03915 376 FunFam Leucine Rich Repeat family protein 225 376 - -
Nenu2g03915 376 Coils Coil 122 142 - -
Nenu2g03915 376 Gene3D Ribonuclease Inhibitor 264 376 IPR032675 -
Nenu2g03915 376 Pfam Leucine Rich repeat 184 204 IPR001611 GO:0005515(InterPro)
Nenu2g03915 376 Pfam Leucine Rich repeat 134 154 IPR001611 GO:0005515(InterPro)
Nenu2g03915 376 Pfam Leucine Rich repeat 286 310 IPR001611 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu2g03915 - -