AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu2g04010 ATGAAGGCAGTTGTAGAAGCTTTACTGGTGCTTTTGCTTCTTGGGGCTCAGGATGTATTTGGTTCAACTTCGCTGTCCACTTATCCTGCATTTCTCTGGTTTCCCCAAACCTATGAATCGGACAATGGGATTAAGGAAGCTGTTGACTATCGCACCATATATCCAAAGGATTTAGCCAAATCTGTTCTGTCTGAAGGCGGCTGGTCAAACTTGCTGTGCCCGAGGGAGAACCGTCAGCAACCTGTTGATATTGCACTTGTTTTTATTGGTAAAGAGTTACAATCTTCAGATATTTCTAGAAACAAAAATGCAGATCCAGCTCTTTTAGACCTGCTCAAGGCCTCATTTAGAAGGTCCAATTTTTCAATGGCATTCCCATATGTTGCTGCATCAGTGGAGGAAGAAGTGATGGAGAAATCTCTTATTTCAGGGTTTATGGAAACTTGTGGGAATGACCTAGGTATTGGTGAGATTGCTTTTCTGGAGTCATGTTCTGTAGATGGTGGCGATCTTAAGAAACTTGCGGATCTCTCCTCAGTCCATGATTATGTAGTTGCCAGAATGGAAAATAAACCAAAGAAGCAGACAGATTTGATTGTGTTTTGTCATGGATCCTTAGAAAATCTTGATCAGATTCGTTCAGAAGGTGAAATATTCTCTGAGCTTATTAGTTCAGTGGAGGAGTCTGGGGCAATGTATACAGTTCTTTATGCTTCAGATCCATACAGGTCAATTAGATATACTTCTTACAAGGTACTGGAAAGGTTTCTTGCAGAAGGTCCTGTAGGAAATGGTTCAGCTAATTCGACTGCTTGTGATGGAGTTTGCAAGACTGTATCATCACTAATTGAAGGTGTTTTAGTTGGGATCGTTTTGCTTATTATCTTGATATCAGGACTCTGCTGTATGGCCGGTATTGACACTCCCACGAGGTTTGAGGCTCCACTGGAATCTTAA 957 41.48 MKAVVEALLVLLLLGAQDVFGSTSLSTYPAFLWFPQTYESDNGIKEAVDYRTIYPKDLAKSVLSEGGWSNLLCPRENRQQPVDIALVFIGKELQSSDISRNKNADPALLDLLKASFRRSNFSMAFPYVAASVEEEVMEKSLISGFMETCGNDLGIGEIAFLESCSVDGGDLKKLADLSSVHDYVVARMENKPKKQTDLIVFCHGSLENLDQIRSEGEIFSELISSVEESGAMYTVLYASDPYRSIRYTSYKVLERFLAEGPVGNGSANSTACDGVCKTVSSLIEGVLVGIVLLIILISGLCCMAGIDTPTRFEAPLES 318
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu2g04010 318 Pfam V0 complex accessory subunit Ac45-VOA1 transmembrane domain 283 313 IPR046756 -
Nenu2g04010 318 PANTHER 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE 1 316 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu2g04010 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4069136 Nenu Nenu2g04010 Nenu-Chr2:108214516 Nenu7g00017 Nenu-Chr7:512860