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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu2g04012 ATGGCTGAATCTCTGATCAAAAGCAACATGTTCTCTCTATACCCCCATTTCTGCATCTCTGTTTCCCCCAAGAAATCTTCTTCTCTTTCTGGGTTTCCTTCTCTTAGCCTCCCACCTCTCAAATCCTCCTCCAAGAGCGATTTTCATGGCCGGAGAATTGTCTTGCGTGAAAGGGAAAGGAACCCTAATACCGGAAGTCTACAGGCTTTGTCCCCACAGATGAGCCATTTGATTGGGAAACCACAGAAATGGTGGGAGAAGGGACTCCAACCCAACATGAAAAAGATTACTTCTGCAGAAGATCTTGTCAATTCTTTACTAACCGCAGGAGATAAACTTGTTATTGTGGACTTCTTCTCTCCAGGCTGTGGAGGATGCAAAGCATTCCATCCGAAGGTATGTCAATTTGCAGAGATGAACCCAGATGTACAGTTTCTTCAAGTGAACTATGAGGACCATAAATCAATGTGCTATAGCCTTAATGTCCATGTCCTTCCCTTCTTCCGGTTTTATAGAGGAGCCCACGGTCGTCTATGCAGCTTTAGCTGCACAAATGCTACTATCAAGAAATTCAGAGATGCACTGGCAAAGCACAACACGGATCGTTGCAGCCTTGGACCTCCAAAAGGGTTGGAGGAAAAAGAGCTCCTTGCTTTGGCTGCTAACAATGATCTCTCCTTCACCTATACACCAAAGAAACCAGTGCAACCAGATGCCGTACTTGTTACAGTAGCAGAAGCATCTCCTGCAAGCGTAGATCCCCTTGTTCCATCAACCTCAAAGGCCATTCAAACTCAAGATTCTGGGAAAGCCTTGGCCACGGCTGGGAGATGA 834 45.92 MAESLIKSNMFSLYPHFCISVSPKKSSSLSGFPSLSLPPLKSSSKSDFHGRRIVLRERERNPNTGSLQALSPQMSHLIGKPQKWWEKGLQPNMKKITSAEDLVNSLLTAGDKLVIVDFFSPGCGGCKAFHPKVCQFAEMNPDVQFLQVNYEDHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHNTDRCSLGPPKGLEEKELLALAANNDLSFTYTPKKPVQPDAVLVTVAEASPASVDPLVPSTSKAIQTQDSGKALATAGR 277
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu2g04012 277 CDD TRX-family 107 173 - -
Nenu2g04012 277 PANTHER THIOREDOXIN, MITOCHONDRIAL 45 232 - GO:0009507(PANTHER)|GO:0045454(PANTHER)
Nenu2g04012 277 MobiDBLite consensus disorder prediction 253 271 - -
Nenu2g04012 277 FunFam Thioredoxin-like 1-2, chloroplastic 82 200 - -
Nenu2g04012 277 Pfam Thioredoxin 104 174 IPR013766 -
Nenu2g04012 277 Gene3D Glutaredoxin 86 204 - -
Nenu2g04012 277 SUPERFAMILY Thioredoxin-like 82 199 IPR036249 -
Nenu2g04012 277 ProSiteProfiles Thioredoxin domain profile. 55 200 IPR013766 -
Nenu2g04012 277 MobiDBLite consensus disorder prediction 251 277 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu2g04012 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4046728 Nenu Nenu2g04012 Nenu-Chr2:108267300 Nenu3g03238 Nenu-Chr3:92607371