Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nenu2g04016 | ATGGAGTTGAATGAGTGGCAGCAGACATGGAGTGGAGGGCTTGATAGAATACTGTGTATGCAAGGAGGAGACGACGACGGCAGCTACGCCAGGAACTCAGACGCCCCTGCATCTGCCATCAGCTTATCAAAGCCATTGCTGATTGCAGCCATTCAATCCATGCGGCTTTTCCACGGGGAGGCGTCACTGAGGATTGCAGACTTGGGCTGTGCGACAGGGTTCAACACCTTGTCTACCATCGACTTGGTCATCGACACCCTGAGGGGGCGCTATAACAAAGACTGTGCTTTCGAGCCTGAATTCGAGGCTTTCTTTTCTGATCTCCCTTCCAACGATTTTAATTCCCTCTTCCGATCCTTGCCTCCATTCATTGATAACAAGAAGAAGCGTTACTATGCAGCTGGAGTGCCGGGATCCTTCTACCACCGCCTCTTTCCTAAAGGGAAGCTTCATGTGGCTGTCAGCTTAAGCGCCCTACACTGGCTTTCTCGGGTATGGCCTATACCAGAGGTGGTGTTGGATAAGAGATCACTGGCTTGGAACAAAGGAAGAGCTTGGATTGATGGAGCAAAGAAAGAGGTTGTGGAAGCCTATGCTAAGCAATCCGATGAGGATTTGAGGGCCTTCCTACAATGCCGAAGAGAAGAGATTGTCGAGGGAGGAACGTTGTTTATATTGATGGCCGGACGGCAAGGCTTGGAGCAGCCGGAGAACCAGTTAGGTGACCCTGATTCAAGGGCCAAGCACCCTTTCACAAGTTCCATGGATCAGGCATGGGAAGACCTCTTAAATGAGGGATTGATTGATGAAGAGACAAGAGACACATTCAACATTCCTGCATACATGAGAAGTATAGAAGAAGTTGAGAAGGCTTTCCATCAATGTGGTGGATTTGAGATACAAAGATTGGAGTACCAGAGAATAGTAGAGCATTCAAAGGAGAAACAAGAGGAGTGGATAAGGGATCCAGTTTCCTATGGTAGAGCCAAAGCCAATCTAGTCCGGGCGACACTCAGACCTATAGTTGAGGCTCACCTTGGACCCAAACTCTCTGAAGAGCTATTCAAAAGATTCGAAAAGAGGGCCTCTGCTGACATAGAAATGCTTCACAAAACATGCTTTTATGGTGTCATTGTTGTATGTGCAATCAGGAAGTGA | 1158 | 48.19 | MELNEWQQTWSGGLDRILCMQGGDDDGSYARNSDAPASAISLSKPLLIAAIQSMRLFHGEASLRIADLGCATGFNTLSTIDLVIDTLRGRYNKDCAFEPEFEAFFSDLPSNDFNSLFRSLPPFIDNKKKRYYAAGVPGSFYHRLFPKGKLHVAVSLSALHWLSRVWPIPEVVLDKRSLAWNKGRAWIDGAKKEVVEAYAKQSDEDLRAFLQCRREEIVEGGTLFILMAGRQGLEQPENQLGDPDSRAKHPFTSSMDQAWEDLLNEGLIDEETRDTFNIPAYMRSIEEVEKAFHQCGGFEIQRLEYQRIVEHSKEKQEEWIRDPVSYGRAKANLVRATLRPIVEAHLGPKLSEELFKRFEKRASADIEMLHKTCFYGVIVVCAIRK | 385 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nenu2g04016 | 385 | PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 17 | 380 | IPR005299 | GO:0008168(InterPro)|GO:0008757(PANTHER)|GO:0032259(PANTHER) | |
| Nenu2g04016 | 385 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 16 | 379 | IPR029063 | - | |
| Nenu2g04016 | 385 | Gene3D | - | 17 | 367 | IPR042086 | - | |
| Nenu2g04016 | 385 | Pfam | SAM dependent carboxyl methyltransferase | 51 | 384 | IPR005299 | GO:0008168(InterPro) | |
| Nenu2g04016 | 385 | Gene3D | Vaccinia Virus protein VP39 | 32 | 309 | IPR029063 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nenu2g04016 | K18886 | gibberellin A4 carboxyl methyltransferase [EC:2.1.1.276] |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 4040459 | Nenu | Nenu1g02387 | Nenu-Chr1:66187546 | Nenu2g04016 | Nenu-Chr2:108410276 | |
| 4046730 | Nenu | Nenu2g04016 | Nenu-Chr2:108410276 | Nenu4g01772 | Nenu-Chr4:61196051 | |
| 4061458 | Nenu | Nenu2g04016 | Nenu-Chr2:108410276 | Nenu1g05179 | Nenu-Chr1:145038498 |