Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nenu6g00984 | ATGGCGCTAGCAGTTGCAGTTAGCTTGACCACCCCGACGACGTCCCTGCAACCCGTCTCGAGAAAGCTCTCTCACAACTTCCCTGTTGTCTACGCCGTTCATGCGGCAGATCCTGCGAAGAAACCCGCATCATCTGATGTTGTCGGAATTAAGGTTGGGTCGTCGAATTGGAGTCCTGATAGCTGGAAATCTAGGAAAGCTCTTCAAATTCCGGTTTACCCAAACCAAGAAGAACTTAACAAGGTTTTGGAGGAACTTGAGAGTTTCCCTCCACTTGTGTTCGCCGGGGAAGCGAGGAAGTTGGAGGAGCGACTCGCAAATGCTGCCGTTGGGAAGGCTTTTCTGCTTCAGGGTGGAGATTGCGCCGAGAGTTTCAAGGAATTCAGCGCCAATAACATTAGAGATACATTGAGGGTTTTGTTGCAGATGGGGGTGGTCCTCACCTTTGGTGCTCAGATGCCCATCATCAAGGTGGGACGGATGGCAGGCCAATTTGCAAAACCTCGGTCTGAACCATTTGAGATCAAAGATGGGGTTAAGCTCCCCAGTTATCAGGGAGACAATATCAATAGTGATGCTTTCGATGAAAAATCCAGAGCACCAGATCCCCAAAGGCTGATAAAAGCATATTCTCAGTCTGGATGCACATTGAATCTTCTCAGAGCATTTACTACTGGTGGATATGCAGCTATGCAAAGAGTCTCGCAGTGGAACCTTGATTTCACAGAACACAGTGAGCAAGGAGACAGGTACATGGAACTTGCACAGAGGGTAGATGAAGCTCTTGGATTCATGGCTGCTGCTGGACTTACTCTAGATCATCTCATAATGACCACCACTGAATTCTGGACATCTCATGAATGCCTTCATCTGCCATATGAGCAAGCATTGACAAGGGAGGATTCAACAACCGGTCTATACTATGATTGCTCTGCTCACATGCTTTGGGTGGGTGAGAGAACTCGGCAGTTGGATGGAGCTCATGTTGAATTCCTTAGGGGTGTAGCTAACCCTCTAGGTATAAAGGTGAGTGACAAGATGGATCCAAAGGAGCTTGTAAAATTATGTGAGATTCTCAACCCTCACAACAGGGCTGGGAGGCTGACAATAATCACCCGAATGGGGGCAGAAAACATGCGGGTGAAACTTCCCCATCTGATAAGAGCGGTGCGCCAGGCTGGGCTTATTGTAACATGGGTGAGTGATCCTATGCATGGGAATACCATCAAGGCTCCATGTGGCCTCAAGACACGTTCATTTGATTCGATAAGGTCGGAGTTGAGGGCATTCTTTGATGTTCATGAACAAGAAGGGAGCCACCCAGGAGGCGTTCATTTGGAGATGACTGGTCAGAACGTCACAGAATGCATTGGAGGATCAAGGACAGTGACTTTTGATGACTTGAGCTCCCGATACCATACACATTGTGACCCCAGGCTCAATGCTTCACAGTCCCTAGAGTTGGCATTCGCCATTGCTGAGAGGCTGAGAAAGAGAAGAATAAGATCCGGCAAGTCCTTCCTCAAAAGCCAGCAGGAAAATGGTTCTGTTGTCTAG | 1557 | 48.3 | MALAVAVSLTTPTTSLQPVSRKLSHNFPVVYAVHAADPAKKPASSDVVGIKVGSSNWSPDSWKSRKALQIPVYPNQEELNKVLEELESFPPLVFAGEARKLEERLANAAVGKAFLLQGGDCAESFKEFSANNIRDTLRVLLQMGVVLTFGAQMPIIKVGRMAGQFAKPRSEPFEIKDGVKLPSYQGDNINSDAFDEKSRAPDPQRLIKAYSQSGCTLNLLRAFTTGGYAAMQRVSQWNLDFTEHSEQGDRYMELAQRVDEALGFMAAAGLTLDHLIMTTTEFWTSHECLHLPYEQALTREDSTTGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPKELVKLCEILNPHNRAGRLTIITRMGAENMRVKLPHLIRAVRQAGLIVTWVSDPMHGNTIKAPCGLKTRSFDSIRSELRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFAIAERLRKRRIRSGKSFLKSQQENGSVV | 518 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nenu6g00984 | 518 | Pfam | Class-II DAHP synthetase family | 57 | 493 | IPR002480 | GO:0003849(InterPro)|GO:0009073(InterPro) | |
| Nenu6g00984 | 518 | PANTHER | PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 | 32 | 505 | IPR002480 | GO:0003849(InterPro)|GO:0009073(InterPro) | |
| Nenu6g00984 | 518 | NCBIfam | 3-deoxy-7-phosphoheptulonate synthase class II | 57 | 500 | IPR002480 | GO:0003849(InterPro)|GO:0009073(InterPro) | |
| Nenu6g00984 | 518 | Gene3D | Aldolase class I | 90 | 252 | IPR013785 | - | |
| Nenu6g00984 | 518 | Gene3D | Aldolase class I | 253 | 498 | IPR013785 | - | |
| Nenu6g00984 | 518 | FunFam | Phospho-2-dehydro-3-deoxyheptonate aldolase | 246 | 498 | - | - | |
| Nenu6g00984 | 518 | SUPERFAMILY | Aldolase | 54 | 497 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nenu6g00984 | K01626 | 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nenu | Nenu-Chr1:107674036 | Nenu6g00984 | Nenu-Chr6:35196067 | dispersed | |
| Nenu | Nenu-Chr5:66926305 | Nenu6g00984 | Nenu-Chr6:35196067 | dispersed | |
| Nenu | Nenu-Chr1:13354146 | Nenu6g00984 | Nenu-Chr6:35196067 | wgd |