AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g00993 ATGTCCATGGCCTTGTTTTCTCCTTCTCCCTCTCATCTTCCGACCCTCCCTGCCAAACTTTCATCAAGAACCCATTTTGCTCAGAAGCCTTCTCTCTCTTTCATCTCCAAGAGAAGTCTGTGTCTGTTGGCTGCTAAGGCATCGGATAATGAAACTGGAGTGGTAAGTTCAGTTGCTACCATTGTAGAGGAGGAGAAAGTAGAGAAGGAGGAAGTTTCCCCTGCTAAGACTGAGCAAAAGTTGGAAAAAGAGGAGGACTCTATTGGGTCGAATGGAGCAGCCTCGTCGGTGTTGAAGCCTGTTCCCGGATTCCAAGACCCCAGATGGGTCGCAGGGACTTGGGATTTGAAGCAGTTTAAAAAAGATGGGCAGACCAACTGGGATGCAGTTATTGATGCAGAGGTCGGGAGGAGGAAGTGGCTTGAAAACAACCCAGAACCATCCACTAATGATGACCCTGTAATCTTTGACACCTCAATTATTCCCTGGTGGGCATGGATGAAAAGGTTCCACCTTCCTGAAGCTGAACTACTTAATGGCCGTGCTGCAATGATAGGGTTCTTCATGGCTTATTTTGTAGATAGCTTGACTGGAGTAGGTCTTGTTGACCAAATGGGGAACTTTTTCTGCAAAACTTTCTTATTTATAGCTGTATCTGGAGTTCTTCTTATCAGAAAGAACGAGGATTTAGAGACTCTTAAAAAACTTGTGAAAGAAACAACGTTCTATGACAAGCAGTGGCAAGCAACCTGGCAGGATGAGACTGCTAATGGTTCCAAGAAAGACTGA 789 45.37 MSMALFSPSPSHLPTLPAKLSSRTHFAQKPSLSFISKRSLCLLAAKASDNETGVVSSVATIVEEEKVEKEEVSPAKTEQKLEKEEDSIGSNGAASSVLKPVPGFQDPRWVAGTWDLKQFKKDGQTNWDAVIDAEVGRRKWLENNPEPSTNDDPVIFDTSIIPWWAWMKRFHLPEAELLNGRAAMIGFFMAYFVDSLTGVGLVDQMGNFFCKTFLFIAVSGVLLIRKNEDLETLKKLVKETTFYDKQWQATWQDETANGSKKD 262
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g00993 262 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 143 225 - -
Nenu6g00993 262 SUPERFAMILY Chlorophyll a-b binding protein 100 210 - -
Nenu6g00993 262 MobiDBLite consensus disorder prediction 67 93 - -
Nenu6g00993 262 Gene3D Chlorophyll a-b binding protein domain 58 215 - -
Nenu6g00993 262 MobiDBLite consensus disorder prediction 67 87 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g00993 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:13645592 Nenu6g00993 Nenu-Chr6:35351277 dispersed
Nenu Nenu-Chr6:35348032 Nenu6g00993 Nenu-Chr6:35351277 tandem