AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01000 ATGCTCTGCACGGGGAGAGTTCTGGCGCTTTCGCCTCCTCTCACCCCTTTCGTCATTCCTCACAATTCACCATTTTCTAACTCCAGATTTCATTCTGTAGAGCTTAAATCCGACCTCAAACGGAGATTAATGGCAACTGACCCTCAGTCCTCTTCTTCTGCTACGTCCATCGATGCCAATTCCGCGGACAAAAATGCAGCTGGCTTTTGTATCATAGAAGGACCCGAGACGGTGCAAGACTTCGCTAAATTGCAACTGGAAGAACTTCAGGACAATATTCGAAATCGAAGAAACAAAATTTTCCTGCACATGGAGGAGGTTCGTAGGCTAAGGATACAGCAGAGGATTAAAAGTGCTGAACTAGGAATTCTAAAGGAGGAACAAGAAAATGAGCTTCCTAATTTTCCCTCATTCATCCCATTTTTGCCTCCATTGGGCTCAGCAAACTTAAAACAGTATTATGCTACTTGTTTCTCTCTCATTGGTGGGATAATGATTTTTGGTGGCTTTCTTGCACCTACTCTAGAGCTTAAATTGGGACTAGGTGGTACATCATATGAAGATTTCATTCGTAGTTTGCATCTGCCCATACAGTTGAGTGAAGTTGATCCTATAGTGGCATCATTCTCAGGAGGAGCAGTTGGAGTCATCTCGGCTCTGATGGTGGTTGAAATAAACAATGTCAAACAACAGGAGCATAAAAGATGCAAATATTGCCTTGGAACTGGCTATCTTGCTTGTGCTCGCTGCTCAAGTACAGGGTCTCTTGTTCTTATTCAGCCAGTTGCAACAGTAAATGGGGGAGATCAGCCTCTACTCCCACCTAGAACTGAACGCTGTTCAAACTGTTCAGGTGCAAGAAAGGTCATGTGTCCTACATGCCTCTGTACAGGGATGGCAATGGCAAGTGAGCATGATCCTCGGATCGATCCATTTGACTAG 942 44.48 MLCTGRVLALSPPLTPFVIPHNSPFSNSRFHSVELKSDLKRRLMATDPQSSSSATSIDANSADKNAAGFCIIEGPETVQDFAKLQLEELQDNIRNRRNKIFLHMEEVRRLRIQQRIKSAELGILKEEQENELPNFPSFIPFLPPLGSANLKQYYATCFSLIGGIMIFGGFLAPTLELKLGLGGTSYEDFIRSLHLPIQLSEVDPIVASFSGGAVGVISALMVVEINNVKQQEHKRCKYCLGTGYLACARCSSTGSLVLIQPVATVNGGDQPLLPPRTERCSNCSGARKVMCPTCLCTGMAMASEHDPRIDPFD 313
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01000 313 Coils Coil 79 99 - -
Nenu6g01000 313 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 50 302 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01000 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr6:53528305 Nenu6g01000 Nenu-Chr6:35438340 transposed
Nenu Nenu-Chr1:13811457 Nenu6g01000 Nenu-Chr6:35438340 wgd