AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01012 ATGATCTCAAACTTTGGCTTTGACTCTTACTTGCTCAAGTTTGATTCAAGATTGAAACGGGATAACACTTTTGACAGAGGTCCGTGGAACTTCAACGATGATGCAATTGTGATCCTAAAGGCACATTCATTCATGACTCTACACTTTCAACAAGATTACATCTCAAAATGGAGTATCAACCTTACACAAGTGAAGGAGCGGTCTAGCCCCATGAGCTGGTTGGAAAAGCTAGGGCTAGGTTTTGGCAACAGAGCTACTGAAACCTCCATGGATTCTTCTTCTTCGTCATCCATCGCTCAAGACCCCGACGATGACATCCCCGCGCCAGGTCAGCAGTTCGCTCAATTTGGCGCCGGATGCTTCTGGGGTGTCGAATTGGCTTTCCAGAGGGTTCCTGGTGTTACGAAGACGGAGGTCGGATATAGTCAAGGTCATTTGCATAATCCGTCTTATAGCGACGTCTGCTCGGGCACGACTCAGCATTCGGAGATTGTTAGGGTTCAATATGATCCAAAGGAGTGCAGTTACGAGAATTTGCTTCAAGTGTTTTGGGCTCGCCATGATCCTACCACGCTTAATCGGCAGGGGAATGATGTTGGAAGACAGTACAGATCTGGAATATACTTTTACACACCAGATCAGGAGAAAGCTGCACGAGAATCCATGGAGCAACACCAGAAAGAGCTAAGAAGGGAAATTGTTACTGAGATTCTGCCAGCCAAAAAGTTCTACAGAGCCGAAGAATACCACCAACAATACCTTGAGAAAGGGGGCCGATTTGGGACGAAGCAGTCAGCTGGGAAAGGTTGCAATGATCCAATTCGATGCTATGGCTGA 837 46.71 MISNFGFDSYLLKFDSRLKRDNTFDRGPWNFNDDAIVILKAHSFMTLHFQQDYISKWSINLTQVKERSSPMSWLEKLGLGFGNRATETSMDSSSSSSIAQDPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGHLHNPSYSDVCSGTTQHSEIVRVQYDPKECSYENLLQVFWARHDPTTLNRQGNDVGRQYRSGIYFYTPDQEKAARESMEQHQKELRREIVTEILPAKKFYRAEEYHQQYLEKGGRFGTKQSAGKGCNDPIRCYG 278
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01012 278 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 114 257 IPR002569 GO:0008113(InterPro)
Nenu6g01012 278 SUPERFAMILY Peptide methionine sulfoxide reductase 107 258 IPR036509 GO:0008113(InterPro)
Nenu6g01012 278 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 94 276 IPR050162 GO:0005737(PANTHER)|GO:0008113(PANTHER)|GO:0034599(PANTHER)|GO:0036456(PANTHER)
Nenu6g01012 278 MobiDBLite consensus disorder prediction 87 101 - -
Nenu6g01012 278 FunFam Peptide methionine sulfoxide reductase 101 278 - -
Nenu6g01012 278 Gene3D Peptide methionine sulphoxide reductase MsrA 96 278 IPR036509 GO:0008113(InterPro)
Nenu6g01012 278 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 111 268 IPR002569 GO:0008113(InterPro)
Nenu6g01012 278 Pfam Peptide methionine sulfoxide reductase 114 256 IPR002569 GO:0008113(InterPro)
Nenu6g01012 278 MobiDBLite consensus disorder prediction 87 109 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01012 K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:14527105 Nenu6g01012 Nenu-Chr6:35695375 wgd