Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nenu6g01012 | ATGATCTCAAACTTTGGCTTTGACTCTTACTTGCTCAAGTTTGATTCAAGATTGAAACGGGATAACACTTTTGACAGAGGTCCGTGGAACTTCAACGATGATGCAATTGTGATCCTAAAGGCACATTCATTCATGACTCTACACTTTCAACAAGATTACATCTCAAAATGGAGTATCAACCTTACACAAGTGAAGGAGCGGTCTAGCCCCATGAGCTGGTTGGAAAAGCTAGGGCTAGGTTTTGGCAACAGAGCTACTGAAACCTCCATGGATTCTTCTTCTTCGTCATCCATCGCTCAAGACCCCGACGATGACATCCCCGCGCCAGGTCAGCAGTTCGCTCAATTTGGCGCCGGATGCTTCTGGGGTGTCGAATTGGCTTTCCAGAGGGTTCCTGGTGTTACGAAGACGGAGGTCGGATATAGTCAAGGTCATTTGCATAATCCGTCTTATAGCGACGTCTGCTCGGGCACGACTCAGCATTCGGAGATTGTTAGGGTTCAATATGATCCAAAGGAGTGCAGTTACGAGAATTTGCTTCAAGTGTTTTGGGCTCGCCATGATCCTACCACGCTTAATCGGCAGGGGAATGATGTTGGAAGACAGTACAGATCTGGAATATACTTTTACACACCAGATCAGGAGAAAGCTGCACGAGAATCCATGGAGCAACACCAGAAAGAGCTAAGAAGGGAAATTGTTACTGAGATTCTGCCAGCCAAAAAGTTCTACAGAGCCGAAGAATACCACCAACAATACCTTGAGAAAGGGGGCCGATTTGGGACGAAGCAGTCAGCTGGGAAAGGTTGCAATGATCCAATTCGATGCTATGGCTGA | 837 | 46.71 | MISNFGFDSYLLKFDSRLKRDNTFDRGPWNFNDDAIVILKAHSFMTLHFQQDYISKWSINLTQVKERSSPMSWLEKLGLGFGNRATETSMDSSSSSSIAQDPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGHLHNPSYSDVCSGTTQHSEIVRVQYDPKECSYENLLQVFWARHDPTTLNRQGNDVGRQYRSGIYFYTPDQEKAARESMEQHQKELRREIVTEILPAKKFYRAEEYHQQYLEKGGRFGTKQSAGKGCNDPIRCYG | 278 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nenu6g01012 | 278 | NCBIfam | peptide-methionine (S)-S-oxide reductase MsrA | 114 | 257 | IPR002569 | GO:0008113(InterPro) | |
| Nenu6g01012 | 278 | SUPERFAMILY | Peptide methionine sulfoxide reductase | 107 | 258 | IPR036509 | GO:0008113(InterPro) | |
| Nenu6g01012 | 278 | PANTHER | MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE | 94 | 276 | IPR050162 | GO:0005737(PANTHER)|GO:0008113(PANTHER)|GO:0034599(PANTHER)|GO:0036456(PANTHER) | |
| Nenu6g01012 | 278 | MobiDBLite | consensus disorder prediction | 87 | 101 | - | - | |
| Nenu6g01012 | 278 | FunFam | Peptide methionine sulfoxide reductase | 101 | 278 | - | - | |
| Nenu6g01012 | 278 | Gene3D | Peptide methionine sulphoxide reductase MsrA | 96 | 278 | IPR036509 | GO:0008113(InterPro) | |
| Nenu6g01012 | 278 | Hamap | Peptide methionine sulfoxide reductase MsrA [msrA]. | 111 | 268 | IPR002569 | GO:0008113(InterPro) | |
| Nenu6g01012 | 278 | Pfam | Peptide methionine sulfoxide reductase | 114 | 256 | IPR002569 | GO:0008113(InterPro) | |
| Nenu6g01012 | 278 | MobiDBLite | consensus disorder prediction | 87 | 109 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nenu6g01012 | K07304 | peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nenu | Nenu-Chr1:14527105 | Nenu6g01012 | Nenu-Chr6:35695375 | wgd |