Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nenu6g01039 | ATGGCCGTAGCATCTCCGAGCAAAGAGAAGGCCGAACCTTCTCAGTCAATTGAGTCCATTCCTTCTTCTCCATTGGTTTCGAAATCGGGTTCAGACTCCGGTTCTGAAACCTCGTCTTTAGGTGTTGTTGATCCCTCTGATCGTAACGAGCAATCTGATTCGTCGGTTAACCACCGTAAAGATGTTGAAATCCAGTCTGCAGCATCTTTGAGAAGTGAAGAGTATCGGCAACTGTTTCGTCTTCCACCTGACGAAGTCCTTGTTCAAGACTTCAATTGTGCCCTCCAAGAGAATATCCTTCTTCAGGGTCATATGTACTTGTTTGTTCATCATATTTGCTTTTATTCTAACATTTTTGGGTTTGAGACAAAGAAAATAATCACCTTCCATGAGGTCACATGTGTACGGAAAGCAAAGACAGCAGCAATCTTCCCTAATGCCATAGAAATTCTAGCTGGGGGGAAAAAGTACTTCTTTGCGTCTTTTCTGTCCCGCGATGAAGCTTATCGTCTGATTGTTGATGGATGGGCTCAACATAATGATCGCGTGAATGCCCAAATAGATTGCCAGGAGTCAAAATCTGACAATGGCAGCCAAGATGCCCTTGTTATATTTGAAAACTCCAAGAGCTTCAAACGACAAACTAACGACCTTTATTCCATGGACAGAAACAAAGATTCTCGGGTTCTAGAAGAATGTAACCGTCTATCCAATGGTGAGGATGATATAAGTGTATCAACAAGACATTCAGAAACACTAGAGAATGGAGAAGAAGATCTAGAACCTGTTGCAAATGCTGAGACTTTGCTGTCTAGAAAGCCTTTCATATGGAAGCCTGAGGATGCCAATGCCCCTAAGATACCTGAGTGTTATACATTGGTTGCAGAGTCAAAATTTCCGATTCAGCTAGAGGAGTTTTTCAATCTCTTTTTCTCAGATGAAGCTGTTAATTTTCTTGAATCATTTCATACAAGATGCGGAGCCAAAGAGTTTAGGTGCACTTCATGGTATGAAGAGCAATTTGGATATGCACGTGATGTATCATTTCAGCATCCAATAAAACTGTATTTCGGTGCGCGATATGGTCACTGCCAGGGGATACAGAAAGTTAGAGTTTACCGAGACAGACATATGATTGTTGAGACATCACAAGAAATCAGCGATGTACCTTATGGGGATTATTTCCGTGTTCAGGGGCTTTGGGATGTGAAGAGCACTGGTGATGAAGGAAATAGTTATTGTATTTTGCATGTCTACATAAATGTGGCATTTTCTAAGAAAACTATGTGGAGAGGGAAAATAGAGCAGTCCACAGCAGATGAATGCCGAGATGCTTATTCAATTTGGATAAACAATGCACATGAATTGTTGAAGCAGAAGCACCTTACGAGACAAGAAGATCGGGCTGCTAATGGAGTTGAAACTGATGCTGCTCAAGTGGATAGGCACACTAAAATTGAAGAATCTTCAGAAGGGTTACATGATGCAAGGAATCATGCAGGGCACCCACAGTTGGCTTCTGATTCTATGGACAGTAATAGGCAATTTGGAAATCCATTGCAAGGAATTTTGAATGACACAACCTCCGTTTCATCTTTATCTAAAGAATTGTTGACAACACTATGTTCCTATTTGAGAAGTCGAAGCCACCTTCCTCTAATTTTGGTTATCACCTCAGTTTTGATACTGCTTTTGATGCAGCTTAGCATAGTTGTGCTATTAACTAGAGCCCCTCAAGTACATATTATTCCTCAAGTGGATTATATAAACTCTATTGGTAGTCGTGGCAATGGAGCGGAGGAAATAGCTTTGTTAGAGAAGCGGGTTCACCTCCTCAGCGATGAAATGGTTGTGGTTGGGACCCGATTAGAGAAGTTGCACCAGGAGTACCTAGAGTTGACAGCACGCCTACATGACCTTAAACAGTTCAAGAAACAAAGATGA | 1944 | 41.56 | MAVASPSKEKAEPSQSIESIPSSPLVSKSGSDSGSETSSLGVVDPSDRNEQSDSSVNHRKDVEIQSAASLRSEEYRQLFRLPPDEVLVQDFNCALQENILLQGHMYLFVHHICFYSNIFGFETKKIITFHEVTCVRKAKTAAIFPNAIEILAGGKKYFFASFLSRDEAYRLIVDGWAQHNDRVNAQIDCQESKSDNGSQDALVIFENSKSFKRQTNDLYSMDRNKDSRVLEECNRLSNGEDDISVSTRHSETLENGEEDLEPVANAETLLSRKPFIWKPEDANAPKIPECYTLVAESKFPIQLEEFFNLFFSDEAVNFLESFHTRCGAKEFRCTSWYEEQFGYARDVSFQHPIKLYFGARYGHCQGIQKVRVYRDRHMIVETSQEISDVPYGDYFRVQGLWDVKSTGDEGNSYCILHVYINVAFSKKTMWRGKIEQSTADECRDAYSIWINNAHELLKQKHLTRQEDRAANGVETDAAQVDRHTKIEESSEGLHDARNHAGHPQLASDSMDSNRQFGNPLQGILNDTTSVSSLSKELLTTLCSYLRSRSHLPLILVITSVLILLLMQLSIVVLLTRAPQVHIIPQVDYINSIGSRGNGAEEIALLEKRVHLLSDEMVVVGTRLEKLHQEYLELTARLHDLKQFKKQR | 647 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nenu6g01039 | 647 | ProSiteProfiles | VASt domain profile. | 290 | 461 | IPR031968 | - | |
| Nenu6g01039 | 647 | CDD | PH-GRAM-GRAMDC | 83 | 176 | - | - | |
| Nenu6g01039 | 647 | PANTHER | PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC | 9 | 641 | - | GO:0043069(PANTHER) | |
| Nenu6g01039 | 647 | MobiDBLite | consensus disorder prediction | 467 | 512 | - | - | |
| Nenu6g01039 | 647 | FunFam | GRAM domain containing 1B | 71 | 179 | - | - | |
| Nenu6g01039 | 647 | Pfam | GRAM domain | 75 | 180 | IPR004182 | - | |
| Nenu6g01039 | 647 | Coils | Coil | 623 | 643 | - | - | |
| Nenu6g01039 | 647 | Pfam | VAD1 Analog of StAR-related lipid transfer domain | 294 | 440 | IPR031968 | - | |
| Nenu6g01039 | 647 | MobiDBLite | consensus disorder prediction | 9 | 50 | - | - | |
| Nenu6g01039 | 647 | MobiDBLite | consensus disorder prediction | 478 | 498 | - | - | |
| Nenu6g01039 | 647 | SMART | gram2001c | 73 | 139 | IPR004182 | - | |
| Nenu6g01039 | 647 | Gene3D | - | 71 | 179 | IPR011993 | - | |
| Nenu6g01039 | 647 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nenu6g01039 | K27900 | vascular associated death 1, chloroplastic |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nenu | Nenu-Chr1:15389814 | Nenu6g01039 | Nenu-Chr6:36265370 | wgd |