AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01074 ATGAATACTCGTCTAGCGTCGCTCTCTGTCTCTTTCTCTCGCCGTCTCGCCCTCGCCCTGAAACGTTCCGCATCTTTGATGCATCAATCCTCGGAAAGCATAGACCATGCCCATCAACGATTTCGACAAAACGTGATCGTGATGCGGCACGGTGACCGGATTGACAACGCAGAGCCCTTGTGGGTCACCACGGCGGTGCGCCCCTGGGACCCACCGCTCACGGAAGCCGGCAAAGTCCGAGCTTTCTGCACCGGGAGGGAGCTTCGTGACAAGCTTGGTTTTCGGATTCACAGAGTGTTCGTTTCGCCTTTCCTCCGCTGCATCCAAACCGCTTCGCAGGTCGTCTCTGCTCTCTGCGCCGTTCAGGATGACCCTACCAATATGAACTCCGAAAAAGTAGCTATAAATCCCTCTAAGCTCAAGGTCTCAATTGAGTACGGGTTGTGTGAAATCATAGGTAAGGCTGCTATAAGACCTGCTCTTGCTCCTAAAGATGGAGATTTTGGTTTTAACATACCAGAGCTTGAAGAGATGTTACCGACCGGGACAGTGGATCACTCGGTAGAGCGTGTGTACCAACAGTTGCCAAAATGGGAGGAGTCGGTGACGGATGCGAGGTTCAGATATGAAAATGTTATTCGTGCACTTGCTGACAAATTTCCTACTGAAAATTTGTTGCTTGTCACACACGGTGAAGGAGTTGGGGTTTCAATTTCATCATTCCTGGAGAACACAGCTGTATATGAAATAGAGTACTGTGCATATTCACACTCACAGAGATTAATCTCATTTAACCCTAACCAGACCTTCACTGCAGGAAGCTTTGAGGTATTCACAAAGAACAGTGAATCTGGAATACGTTATTGCCCCATGAACACCTTGGCTCCTGATGTCTGA 897 49.05 MNTRLASLSVSFSRRLALALKRSASLMHQSSESIDHAHQRFRQNVIVMRHGDRIDNAEPLWVTTAVRPWDPPLTEAGKVRAFCTGRELRDKLGFRIHRVFVSPFLRCIQTASQVVSALCAVQDDPTNMNSEKVAINPSKLKVSIEYGLCEIIGKAAIRPALAPKDGDFGFNIPELEEMLPTGTVDHSVERVYQQLPKWEESVTDARFRYENVIRALADKFPTENLLLVTHGEGVGVSISSFLENTAVYEIEYCAYSHSQRLISFNPNQTFTAGSFEVFTKNSESGIRYCPMNTLAPDV 298
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01074 298 SMART PGAM-5 44 237 IPR013078 -
Nenu6g01074 298 Gene3D - 27 262 IPR029033 -
Nenu6g01074 298 PIRSF PRIB5 29 298 IPR012398 -
Nenu6g01074 298 Pfam Histidine phosphatase superfamily (branch 1) 45 117 IPR013078 -
Nenu6g01074 298 PANTHER UBIQUITIN-ASSOCIATED AND SH3 DOMAIN-CONTAINING BA-RELATED 44 288 IPR051710 -
Nenu6g01074 298 FunFam Phosphoglycerate mutase family protein 41 264 - -
Nenu6g01074 298 CDD HP-PGM-like 44 122 IPR013078 -
Nenu6g01074 298 SUPERFAMILY Phosphoglycerate mutase-like 44 265 IPR029033 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01074 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:16708616 Nenu6g01074 Nenu-Chr6:37037487 wgd