AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01076 ATGAAGAAATCTACACAAGCCCAAATCCATCACAGTCACCTCTCATCTGAAACCCATTCTCTAGTCAGACAGACCTCCACTAGGCTAGTAGCTGGAGCACTTGCAATTCAAGCAGCAAACATGGTGAAAGCAATCAGAGTTTATGAGCATGGTGGACCAGAGGAGGATGTGGAGATAGGAGAACCAAAAGAGGATGAGATCCGTGTCAAAAACATTGCGATCGGGTTCAACTTCATTGATGTGTATTTCCGCAAAGGGGTTTATAAACCTGCTACATTGCCCTTCATCCCAGGAATGGAGGCAGTTGGAGTAGTGACTGATGTGGGCCCTGGATTGACAGGCAGAAAAGTCGGGGATCTAGTTGCCTATGGGGGTAAGAAGATGGGCTCTTACACTGAAGAACAGATACTCCCTGCTCAAGTTACAGTGCCAGTCCCACCTTCTATAGAGCCTAAAGTTGCTGCCTCTGTTATGCTTAAGGGGATGACTGCTCATTTTTTGCTCCGCCGTTGCTTCAAGAAGGCAGCTCAAGCCAAGGAAGATGGATGCCACCATGTCATAATTTATACACAGGATGATTTTGTTTCCATAGTCAACCAAATAACATCAGGCAAAGGAGTTGATGTCGTCTATGACTCTGTAGGCAAAGATACATTTCAGGGGTCATTGGCGTGTTTAAAGACTCGTGGGTACATGGTGAGCTTTGGGCAGTCGTCTGGCACTCCAGATCCAGTTCCATTGTCAGCACTCGCCGTTAAGTCTTTGTTCCTGACAAGGCCTTCACTCATCCAGTACACTGAAACTCCGGATGAACTGTTGGAAGCTGCTGGGGAGGTATTCACTAACGTTGCATCAGGTATCCTACGAGTCCGCATCAACCATGTATACCCTTTGTCACAGGCTGCACAGGCTCATGCAGATGTTGAGAATCGGAAAACATCTGGGTCTATAGTGTTGGTACCAGATAGTGCCGAGCAGTGA 981 47.2 MKKSTQAQIHHSHLSSETHSLVRQTSTRLVAGALAIQAANMVKAIRVYEHGGPEEDVEIGEPKEDEIRVKNIAIGFNFIDVYFRKGVYKPATLPFIPGMEAVGVVTDVGPGLTGRKVGDLVAYGGKKMGSYTEEQILPAQVTVPVPPSIEPKVAASVMLKGMTAHFLLRRCFKKAAQAKEDGCHHVIIYTQDDFVSIVNQITSGKGVDVVYDSVGKDTFQGSLACLKTRGYMVSFGQSSGTPDPVPLSALAVKSLFLTRPSLIQYTETPDELLEAAGEVFTNVASGILRVRINHVYPLSQAAQAHADVENRKTSGSIVLVPDSAEQ 326
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01076 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 151 270 IPR036291 -
Nenu6g01076 326 MobiDBLite consensus disorder prediction 1 20 - -
Nenu6g01076 326 Gene3D - 160 171 - -
Nenu6g01076 326 Pfam Zinc-binding dehydrogenase 182 319 - -
Nenu6g01076 326 Gene3D - 266 319 - -
Nenu6g01076 326 Gene3D - 55 159 - -
Nenu6g01076 326 PANTHER QUINONE OXIDOREDUCTASE PIG3-RELATED 43 173 - GO:0003960(PANTHER)|GO:0005829(PANTHER)|GO:0016651(PANTHER)|GO:0017091(PANTHER)|GO:0070402(PANTHER)
Nenu6g01076 326 Gene3D - 173 265 - -
Nenu6g01076 326 SUPERFAMILY GroES-like 42 173 IPR011032 -
Nenu6g01076 326 SMART PKS-ER-names-mod 51 319 IPR020843 GO:0016491(InterPro)
Nenu6g01076 326 CDD QOR2 43 321 IPR047618 GO:0003960(InterPro)
Nenu6g01076 326 Pfam Alcohol dehydrogenase GroES-like domain 64 146 IPR013154 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01076 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:16753446 Nenu6g01076 Nenu-Chr6:37099583 wgd