AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01080 ATGGATTCTCAGAACAAAGCTCAAGAACTCGCCTCAATGATTCTTGACGCTTCGTCTCCAGCTAATATATCTTCTTCTTGCACTGCAATCGAAACTTTCCTTCAAAAGTACAACGCCGACCAGAGCCGATCGTTCTTTTCGATTGCATTTCCTGCGCTTATTTGCAAGATTTTCGGGTTCGATGAATCGTCGTCACAGAAATCGCCCTCGTCGTCTAATGGATGGATTGATCAGGTTCAGGCGTCGAACAATTCTGAACTTGCAGGTAGGATTTTTAATCTCCTTTCCCCGCATGGTGTTTTGATTTCATCGATTTCTGCTGTTGATCGGCATTCCTTGGTGAAGTATGTCTTTCCGTTCGAGAGATTGCCGGAATGGGCCAAGTTTATGCTTCAGAACGGGAGGGATTGCGGTGTTTTATCTGATTTATGTCCGTTGTTTAAAGGGAGGATTAAGGAGGGTCCAGTAAAGGGTATTTACCAAGTTCAGTTGAACGTGTTCGAGTACTACATGTTCTGGTTCGCTTACTATCCTGTGTGCAAAGGGAACAGTGAGAATTCCAATGCAGTGGTGGTTACGAAAAGCCGGCGGTTTAGGATAGAGAATTGGACGTCTTCTCTTCCAGTTTTGGGTGGTGCCAACCGTGGTTTAGGGCAAAAAAGCGAATGTGGCTTGTACATACGACTTCTTTATGCTTACCTGCGAGTGTTTGTGCCGAATTATGGGTCCAATTCCAATCAGCCGTACCGTAGTTCTCTCCTTAATTATTCATCGGGATATGACGGCTCGATTGCTTCGCAAGCGGAGTTCCTGGTTTATACTTTAATAAACTTTTGGTTGGTTGATAATGATTTTTCACCACTTCCTGTAAGTGTATGCCAATCTTTCGGTTTATCTTTTCCTTTTCGAGCAGTTCTGGGTGAGACTCCCCCAGCATCTGGTCTGGGAGAAGTTGTTAAGTTTTTTCTAAAGTATCTCATGAAAAGCTTGGTAGCCCCGGGGGAAGGTTCTGATTCAGTTGAATATAGCGGAAGTCCTCATTGGAGGAATTCAGGTTCTTTTGATGCTGTTAATTCTAGGGTTGCGGTATCATCTTTATCTTCAGGCAGTTCTGTTGGTTCCTGGAACTCTTTGATCCAAAGGCCGCTGTACAGTTACTTGGAACCTTGGAAGCTTAGTATGGAGGATTTTGTGGAGCTTGATGCATTAGTAGATCAACCTATTGAAACATCAAAAAATGGGAATGCTGAGTCTCCAGTTCAGAGAGATGCGATCAAGGATACTTGTCAATCAGCAGCTGGATATTCATTACCTTGGAAAAGCTATGTGGTATCCAATTACCTGTTCTACAGTTCATTGGTAATGCATTTTCTTGGATTTGCTCACAAGTTTCTTCACACTGACGTGGAAACAATAACCCAGATGGTGCTGAAGGTACTGACCATTCTAACATCATCAAGAGAGCTGTTGGACTTAGTAAAGAAAGTAGACGCTGCATTTCATTCTAAACCATCTGGGTCTCCTTCACTGATATTTGATGGCTTATATAAATATGTTCCTTCCATTAGAGAACAGTTGCAGGACTGGGAAGATGGCTTGTGTGAGAGTGACGCTGATGGATCCTTTTTACATGAGAACTGGAACAAGGATTTACGTCTCTTTAATGGTGGTGAAGATGGTGGTCATCAACTCCTCCAGTTGTTGATATTACGAGCGGAGTCTGAGATCCAAGGTACTTGTGGTGATAACATGGCAAACAACCTTCAGACCGTGGGTTCTCTGAAAGCTCAGATGTGTTGTCTATTTGGTGGGTCTGTTGGGGATTCCAGGTCATTTACACCAGATATTAGGCAGGGGCAGCACCAGAGGGATGAAATATTCAAGCCTAGGAGGATTGGGAACCAGCCATTGCCCGCAGTTAAATACAAAGGGGACTGGATGAAGCGGCCCATATCTGATGGAGAGGTTGCATGGTTAGCAAGGCTGCTGGTCCGATTGTCAGATTGGCTGAATGAAAGTCTTGAGCTAAACCATGAAGAGAGCAGCCATGAAGAAGTTCCATCTTTGTCTTATGTGGAGGTGTCCAATGATGAACCGGTTAAGGTTGGTGGAGGCAAGGATGCTCTGAGGATGGTTTTGTCTTGTGTTGCCGCTTGGCTTGTTATGGTGGGTTCAGCTGTACTGAGGTTCATGAAAATACATGGGCTGAGGGTGAATCTGAGGATGTTGGCATCGAAGAAGGTCGTGATGGTTTTCCTTGTATCATTTGTGTTTGGTGTTTTGAAGAAGGCTTTTGCCTGCATTCACAACCCTGGGGTTGTCTGGCATCTTTGA 2334 44.3 MDSQNKAQELASMILDASSPANISSSCTAIETFLQKYNADQSRSFFSIAFPALICKIFGFDESSSQKSPSSSNGWIDQVQASNNSELAGRIFNLLSPHGVLISSISAVDRHSLVKYVFPFERLPEWAKFMLQNGRDCGVLSDLCPLFKGRIKEGPVKGIYQVQLNVFEYYMFWFAYYPVCKGNSENSNAVVVTKSRRFRIENWTSSLPVLGGANRGLGQKSECGLYIRLLYAYLRVFVPNYGSNSNQPYRSSLLNYSSGYDGSIASQAEFLVYTLINFWLVDNDFSPLPVSVCQSFGLSFPFRAVLGETPPASGLGEVVKFFLKYLMKSLVAPGEGSDSVEYSGSPHWRNSGSFDAVNSRVAVSSLSSGSSVGSWNSLIQRPLYSYLEPWKLSMEDFVELDALVDQPIETSKNGNAESPVQRDAIKDTCQSAAGYSLPWKSYVVSNYLFYSSLVMHFLGFAHKFLHTDVETITQMVLKVLTILTSSRELLDLVKKVDAAFHSKPSGSPSLIFDGLYKYVPSIREQLQDWEDGLCESDADGSFLHENWNKDLRLFNGGEDGGHQLLQLLILRAESEIQGTCGDNMANNLQTVGSLKAQMCCLFGGSVGDSRSFTPDIRQGQHQRDEIFKPRRIGNQPLPAVKYKGDWMKRPISDGEVAWLARLLVRLSDWLNESLELNHEESSHEEVPSLSYVEVSNDEPVKVGGGKDALRMVLSCVAAWLVMVGSAVLRFMKIHGLRVNLRMLASKKVVMVFLVSFVFGVLKKAFACIHNPGVVWHL 777
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01080 777 PANTHER ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN 24, MITOCHONDRIAL 1 765 - -
Nenu6g01080 777 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Nenu6g01080 777 Pfam Mitochondrial-associated sphingomyelin phosphodiesterase 9 198 IPR024129 GO:0050290(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01080 K12353 sphingomyelin phosphodiesterase 4 [EC:3.1.4.12]