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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01108 ATGAATATCCTCCGAAGGGTCTCTTCCAATTTCCCGCGAGTTTCGGGATTCGCGCGGAGGACCTTCAATTCAAGTAGATTCCTTGCTGACTCCGTCGACTCTTCCCCTCCCGCTACCGCTCTCGGCGTTCACGTCTTCCATTGCCCTGATGAAGTTGGCATCGTTGCGAAGCTATCGGAATGCATCGCTTCCAGAGGAGGAAACATACTCAGCGTCGATGTCTTCGTCCCCGAAAACAAGAATGTCTTCTATTCCAGAAGTGAGTTTGTATTCGACCCAATTAGATGGCCACGGGCGGAAATAGATGAGGACTTCTTCAAAATTTCAAAATTGTTCAATGCAATGAGATCTGTTGTGAGAGTGCCTGATCTGGATCCCAAATATAAAGTAGCAGTTCTTGCTTCAAAGCAGGACCATTGTCTGGTTGATTTGCTACATGAATGGCAGGATGGCAAACTACCTCTTGATATTACTTGTGTAATAAGTAATCACAATAGAGGTCCAGATACCCATGTGATTCGGTTTCTAGAAAGGCATGGAATTCCATACCATTGTTTGCAAACAAATCGAGGGAATAAAAGAGAAGGAGAGATCTTGGATTTGGTTCATGGAACTGATTTTCTAGTGCTTGCAAGATACATGCAGATATTGTCTCAAAATTTTTTAGAGAGCTATGGGAAGGATATAATTAACATCCACCATGGCCTTTTGCCATCATTCAAGGGTGGAAATCCTCTAAACAGGTTGTCTCCTTGCATTCTTCATGGGCAAAATCATTTGTCCTTGAAATTGATTGGTGCAACCAGTCACTTTGTAACAGAAGAGCTTGATGCAGGACCAATAATAGAGCAGATGGTTGAGAGAGTTTCCCATCGAGATAATCTACAGAGTTTTGTGCTGAAATCTGAGAACCTTGAGAAACAATGCTTAGCAAGGGCAATAAAATCGTATTGTGAGCTTCGAGTGCTGCCTTATCAGGAAAACAAAACTGTTGTATTTTAA 1002 42.51 MNILRRVSSNFPRVSGFARRTFNSSRFLADSVDSSPPATALGVHVFHCPDEVGIVAKLSECIASRGGNILSVDVFVPENKNVFYSRSEFVFDPIRWPRAEIDEDFFKISKLFNAMRSVVRVPDLDPKYKVAVLASKQDHCLVDLLHEWQDGKLPLDITCVISNHNRGPDTHVIRFLERHGIPYHCLQTNRGNKREGEILDLVHGTDFLVLARYMQILSQNFLESYGKDIINIHHGLLPSFKGGNPLNRLSPCILHGQNHLSLKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVLKSENLEKQCLARAIKSYCELRVLPYQENKTVVF 333
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01108 333 PIRSF FormyFH4-hydr 40 333 - -
Nenu6g01108 333 SUPERFAMILY Formyltransferase 129 331 IPR036477 GO:0009058(InterPro)
Nenu6g01108 333 Gene3D - 117 332 - -
Nenu6g01108 333 PRINTS Formyltetrahydrofolate deformylase signature 151 178 IPR004810 GO:0006189(InterPro)|GO:0008864(InterPro)
Nenu6g01108 333 PRINTS Formyltetrahydrofolate deformylase signature 129 151 IPR004810 GO:0006189(InterPro)|GO:0008864(InterPro)
Nenu6g01108 333 PRINTS Formyltetrahydrofolate deformylase signature 306 331 IPR004810 GO:0006189(InterPro)|GO:0008864(InterPro)
Nenu6g01108 333 PRINTS Formyltetrahydrofolate deformylase signature 44 70 IPR004810 GO:0006189(InterPro)|GO:0008864(InterPro)
Nenu6g01108 333 PRINTS Formyltetrahydrofolate deformylase signature 284 306 IPR004810 GO:0006189(InterPro)|GO:0008864(InterPro)
Nenu6g01108 333 Gene3D - 44 116 - -
Nenu6g01108 333 ProSiteProfiles ACT domain profile. 43 123 IPR002912 -
Nenu6g01108 333 PANTHER FORMYLTETRAHYDROFOLATE DEFORMYLASE 1 333 IPR004810 GO:0006189(InterPro)|GO:0008864(InterPro)
Nenu6g01108 333 Pfam Formyl transferase 129 314 IPR002376 GO:0009058(InterPro)
Nenu6g01108 333 SUPERFAMILY ACT-like 46 114 IPR045865 -
Nenu6g01108 333 CDD ACT-F4HF-DF 43 114 IPR044074 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01108 K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10]