AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01114 ATGTGTTGTGCTAGTGAGTTTAGGGATGCACCCATGGATTATGATGACAATGATTTCCAAAACCAGAATTTTCAGTTAGGTGCTGAAGAGAATACCAAATTTCCTCCAGGATTACGTTCATATGCCCTTCCCAAGTTTGATCTGGATGACAGTCTTCATGTCCACCTAAGGTTTGATAGTTTGGTTGAAACTGAGGTTTTACTTGGTATCCAAGGTCAAGAAGAAAACCAGTGGATTGAAGAGTTCTCACGGGGAAATAGTGGGATAGAATTTAGTTCAGGTGCTACTGAATCTTGTTCTATTTCGAGGCACGAAAATGTTTGGTCTGAGGCTACATCCTCAGAATCTGTTGAAATGTTATTGAAATCTGTTGGGCAGGATGAAATGATCACAGGAAAAACTGTTATCAAGGAGTCAGATGCTTGTGATGGAGTCGGTAGATTAACTAGTCAAATGGAACCCACTTTGAATCAAGATGGTGCCGCTCCATCAAATATTGGGGATACTATAGATGCAGGCCCTATATTACCACCTGATGAGTGTCTGGAGAGCTTTTCAGGGTTAAGTCAGGATGTCGTGGACATGTTGCCCCAGGTTGAGATTGAGGCTACACCTCAAACTCAAAAATGTGAAAAATCTGACTGTGAAAGTTTGAGAGATTTGGATCCAAGTATGATTGGTGAAAAGTTGACCTCACCATTGAGTGAGGGTAACCTGGTAATTGACAAAAAATGCAGTGATGCAAATGAGAGGGAAGATGGTTCTCTGGTTGTTAAATCTAAGGAAAACAAGCCACAGGACAATTCAGCAACATCTGAGAGCATGCAAGTTGATAACTTGTTTATCTCTGTGCAGAGTCTTGTTTCAAGTGTTGATGAGTTTAACACCCAAGATGATCAACAGGAGCCAAAGGATGGTTCTGAGCAGATTATCACGTATGAGAATCAGGATGCTAAGCAAGAACTTGATTCTGGGAAAAATGTGGAAGACCAAGTTCTGAGTAAGGATGTTCATCTGGATGATCAAAATTGTAAAGGAAATGCAGTTGCAACTATTGCCAATAATCTAGAGAACCATTCAAGCTCTGTGCTGGATGTTGATTCCACAGTGCAGTTAAAGGAAGGATGCAGTGAGTGTTTATGTTCTGAACAACCTGTTGAGGTCAGCAAAAATGAGGTTGTGGTTTTGCCCAAAAGTGGTGAGATAGGTGATAAAATTGTAGAGACACATGACTCTTCATCTATGTTGGTAAAAGGGGATGATAGTCTTGAAGGAACTGCTGTTAACATCTGTGATAGTGATGAAAGAATTCCATCCAGTCCAGTGTTGGAGATTGACTCTCTAGCACAGATAACAGAGGGACAGGGCCCAATTGTATCTTCTGGGAATCAGGAACACTTGTTAGAAGATGATGGCCACAAACTTGAATGTGGTGTTTCGGTCTGTAATACTGAGACATCTTTATTGAAAGTGGAAGACAACAAACTGCTTGAAACCGAGTTTGACTTTAGCAGCAATAGCCATATTGGAAGTCCTTCCATTTTGATGGCAGAGATCTGTTCCTCAACTAACATAACACATGAAACACAAGCAACTGAAGATATAGAAAATGGTCATAATGGTTTGGGAGTTCAGTGTGATAATGACACTTCAGAGGATCATGTTTCAATTTCCGTTAATGTTGAATCATATCAAACTTGTAGTAGTAGTTCGGTCATTGAGCCCAGTGATGTTTGTAATATTCATAAAGATGTTCCTGTTATTGAAAAGGAGAATGAGAGGATGACTTCTGGTTCAGGTAACAATGAAAGTGAAAATGCTGGCTCTCTTGTTATGGACAAGTGCATAGCATCTTTATCTCATGGTCAATGTACTGCTGAAGCTGATGTGGTTGTTCATGTATCAAAGTCTGATCCGCTTATTGGCAATGAATCAGGAGATGGCAAGTCATCTTTATGTGTTGGGAATTTCACTCGCTTGGAAAAAAGAGAAGAATCTGTAACTGAAACACTTACAGGACCAAGTTTGTTGGTTACAAATGAATGCTCTTCCATGCCAAGTGAGCCGGTTTCTATTTCTGAAGATGAAAAACCTGCATCTTGTGATGGTGTTGGAGAGCAACTGCCTGAGTCATTTTCCCAGTCCTCATTATCCACTGAAACTGTTGGTACAAATTTCCATAATGAACCTGAAGCTGTGGTAGCTGACAAAGTTAATCAAGACCACTTTGGTGAATTGGAAACTCAACCTAGTATCGATGATTCAGTTCTGAAAGAAAACAACGGTGCTGGTGATACAAGAATTTCTGCTGAGAAATGCAAAGAGTCATTCTCGAAAACCACAGGAAGAAATCCTGATCATGGACAGAACCTGACACAGACAGAAATGCCATCCATAGAGGTGTCCTCCCATAATGTTGGACTAAAGGATAAGGAAGAAAAGAAATCTAATTTAGTAGCTGGAGGCAACAATGACCAACAGAACATCCTTGTGCATGCCAAAGATGTTCCTGTAAATGGTAGTGAGGTCTCCTTTAAACCTGCTGCTGATTTCCAAGACCATCCTCTGGGAGTTGGAGATAGTATTCCAGGTTCTGATGAATGTAATTGTGGTTCACCCATTGTTATTAGTTCAAGTGAACTTACTCAAAATAACAAAGAAAAACAGGAGGGGCAGAATGGTTCGTTAGACCAGAATGCCTGTGTTTCTGATTCTGTGGAGGAGCAAGGCTGTAAAATGGGATCTAGCGCTAATGATCTTAAAGGGAATGATGCGACTGAGAATGATAGAAGCTTCACTTTTGAGGTGAGTGCACAAGCTGATTTGCCTGACAGAGAGACTGACAGGGGATGGAGACCATTTCCCAGTATTCAGCCCTATGAATTTCCTCAGGCCGTGGAAGGTTCTCCAACAACATATGGATTAAGCCAAATGGATCCTAAGGTGTTACAAGAAACTTCTCAGGGAAACCATCAAGCATCTGAAGTGGAAGATCTACGTGCTAGTTCTAAGGGTACACCTGAGCCTAAAAGTAGGAGAAGATCTGGCAAAGCAACTGACAGAGAAGCTGCTAAAGATGGGAAGTCTTTAAAAGATCCTCCCAGGCAGACAAAGGATAGGGGTGGAAATTCATGCAATGTATCTTCTAGCTCACGTGGGACACTAAGCCAGGCTGTTCAAGGTGAAGAAATGAGATCCTATGGGTATATTGAAGGCAGTGTTGCAAAACCTTGTGGTGTTCCAACTGTTCAGACATCTACCTTGCCAGATTTGAATAATTCAGCTTCCCCATCCTTGCTGTTTCTGCAGCCTTTCACAGATTTACAACAAGTGCAATTGCGTGCTCAGATCTTTGTTTATGGATCTTTGATCCAAGGAACAGCACCTGATGAGTCATGTATGGTTGCAGCCTTTGGTGATTCTGTATTGAACTTCACAGATGGTGGAAGAAGCTTATGGGATAATGTGTGGCATGCCTCCTTAGAGAGGCTTCACAATCAGAAATGCTTGCACAGTAATCCTGAGACTCCTCTGCCATCACATCTAGGTTCAAGGGTTTCTGAACAATCAAGTAGGCAAAGTTCTCTCCAAAGCAAAACCCTTTGTACTCCTAGTCGATCTGGTGGTAAGGGTAATCCTTCAGCAACTATAAATCCTGCAATTCCCCTTTCACCCCCCTTGTGGAGTATTTCAGCCCCTTCCCGTGATGGATTACAGCCTAGCAGCTCACTTCTGGATGCTAGTCAGGCAATTTCTCCATTGCATCCTTATCAGTCTCCGCACATAAGGCAATTTGTGGGAAATACCAGCCCCTGGTTGTCTCAAGCCCCTTCTGCTGTGCCCTGGATTGTTTCTCCTCCAACTTCAGTGCTTGATGCCAGTGCTCATTACTCTGCCTTTCCCATTTCACAACCTGGTCAGACCTCTATCCGAGAGTTATCAGTACCTCAAACCTCTGGTATGCAGCATTCCCCTCTGAGTTCTTCAGTTCCTTCTGGGGGTCCTGGACCTCTGCTTGAGGCAAAAAGAACAACAGTGTCACCTAGCAAGAATGGTTCTGCTGATCCAAGACTTAGAAAGAGAAAAAAGAATCTAGCTTCTGAAGAAGATGGCAGCATCTCTTTGGTTGCCCAGCCTCAAACTGGATCAGTTTCAGCTGCAGTAGTTACTTCTGTTGCTACCATAACCCCTGCCGTCTCTACAGCTAAAGTTGTTACTGCAAATTTAACTGCTTCATCCACATCTTTGACACAGCACCAGATAATAGGGGGTCAGGACTTGGACCAGAGGGTTATCTTTTCAAAAGAGTCGTGCAGTAAAATTGAACAAGCTAAGCAACAAGCAGAAGAGGCTGCTGCTCTTGCTGCTACTGCAGTCAGGCACAACCAGAGCATATGGAGTCAGCTAAATGTGCAGAAGACTTCTGGTTTGATTTCAGATGTTGAAGTTAAATTAGCTTCTGCAGCTGTTGCAGTAGCAGCAGCTGCTTCGGTTGCAAAGGCAGCAGCAGCGGCTGCTAAGGTTGCAACAGATGCTGCATTGCAAGCTAAGCAGATGGCTGATGAGGCTTTACTCTCAAGAGGAACTGGGCATCATGCTCAAACTACTGAAGCTTCTTTCTCTGATAGTGTGAAGAATATGGGAATGGTAACACCTGCATCAATCTTGAAGTGTAGAGATAAGATCGACAGTTCGAGTTCAATCATTTTTGCTGCAAAGGAGGCTGCTAGGAAAAGGGTTCAAGCTGCTTCAGCTGCCACAAAGAGGGCAGAGAACCTGGATGCAGTGGTGAAAGCTGCTGAACTGGCAGCTGAAGCTGTATCACAGGCAGGAACTATTATTGCAATGGGTGATCCTATACCTTTGGCAATGAATGATTTAGTAGAAGCTGGTCAAGATGGTCATTGGAAAGTACAACAAGTCTCTTCAGAGAAGTTTTCTAAGTCAAGCAATACAAATGAAGGACAATCTAACCTGGACTGTGTTGGAGAAGGTCTTGATAATTCTGCTTCTCATTTGAATGAGCAGTCATCAAGGAAGCAAGAAACAGAACGAGTTACAGACCCGGGAAAGTTATCTTCAAAAGAGCTGTCTAGGCCACTGGTGGAGAACCACATGGGATTGGTGAATGGCGTTAGGAGCAGCGAAAAGGGATTGGGGGGACAAAAAGGTCGTAAAGCATCTGAATCTGCCAAAGCCATTGGGATTGTCTCTGAATCTGAGATTGGATCAAGATTTGGTTCTGTTCCTTTCCAAAATAAGGACCATGAAGGAAATCACTCAGCAAGGTCTTCAAAAGAGAGTAGCATTAAAGAGGGTTCTGTTGTAGAGGTTCTTTCTGACAAGGATGGTTTTAGGAGGGCCTGGTTTGCTGCCAAGGTACTAAGTTTGAAGGATGGACAAGCTTATGTTTGTTACACTGAAGTTCTGCCTGATGAAGGCTTTGGTCAGCTAGAAGAGTGGGTGCCACTTGAAGGTGAAGGTGATATACCACCAAGGGTGCGGATTGCTCATCCTCGGACTGCCATGAAATTTGAGAAGACAAGAAAGCGACGTAGAGCAGCCATTGTTGACTATGCTTGGTCTGTTGGAGATAGGGTGGATGCATGGAAACGTGATGGCTGGTGGGAAGGAATTATTACAGAAAAGAGCAAGGAAGATGAAACGTCTTTGACTGTCCATTTTCCAGCTCAAGGTGATACATTGGTTGTTAAAGCCTGGCATCTTCGACCATCTCTCTTTTGGAAGGATGGGCAATGGATTGAATGGTCCCGTTCAAGGGAAGATAACCCCTATGTTCACGAGGGCGATTCTCCTCAGGAAAAGCGGCCAAAGTTGGGAAGACATGGAGCTGAAACAGATGTTGCAGTTGAGGTGAGTGGCATAGACAATACAGGGAAACCTGAGGAGGCAAGACCTCTGGCTTTATCTGCTAATGAAAAAATGTTTACTGTTGGGAAGAGTACCAAAGAAGGAAATAGTTCTGATGCTCCCAGAACAAAGAGGACTGGTCTGCAGAAGGAAGGTTCTAGGGTTGTTTTCGGTGTTCCTAAACCTGGAAAGAAAAGGAAATTCATGGAAGTAAGCAAACATTATATTGTAGATAAAGGTGGCCAGACAACTGAAGTAAATGATTCAATTAAATTTACAAAGTACTTGATACCTCAAGGATCAGGACCTCGTGGATGGAAAAATACTTGGAAAATTGATTCTGCAGGAAAACAAGCATCTAAATCCAAGCCCAAGCTGCTTAAGTCAGGGAGAACAGGTAGAAACAATTCTGAGAAAGATAGTTCTTCAATGTCTGTCATCTCTGTCTCAAAGGATGGCACTGTGCATGGTCATACCAAAGCTTCTGTTAGCCATGATGAACACATGTCAGAAAAGAAAAACCAGTTGGAACATTGTTCTCTTTCTGATAACAACAAAGCCGCCGAGGATTCAACCTTATTTTCTTCAGTTGCTCGTGCATCTGATGCTCCTTCCTCCAAGAAGAAGTCCTCTTCTATTGAAACCACCCTGAGGACTAAAGGAAAAGCTGCACCTTCTGGTCAGAAGTTGGCTAGAAGTGAAGAAAAGGATGCTGGTCAGTATGATAATACTGCAAAACAAGTTCCTGATGTCATTGAGCCTCGGAGATCAAATCGGAGGATTCAGCCAACATCAAGGCTATTGGAAGGGCTACAGAGCTCCTATATTATCTCCAAGATACCTTCTGCTCCACATGACAAGAATACCAAAACTCAACATAGAAGTGCTCCATCATCAAGGGGAAATAACCACAGCTAA 6789 42.97 MCCASEFRDAPMDYDDNDFQNQNFQLGAEENTKFPPGLRSYALPKFDLDDSLHVHLRFDSLVETEVLLGIQGQEENQWIEEFSRGNSGIEFSSGATESCSISRHENVWSEATSSESVEMLLKSVGQDEMITGKTVIKESDACDGVGRLTSQMEPTLNQDGAAPSNIGDTIDAGPILPPDECLESFSGLSQDVVDMLPQVEIEATPQTQKCEKSDCESLRDLDPSMIGEKLTSPLSEGNLVIDKKCSDANEREDGSLVVKSKENKPQDNSATSESMQVDNLFISVQSLVSSVDEFNTQDDQQEPKDGSEQIITYENQDAKQELDSGKNVEDQVLSKDVHLDDQNCKGNAVATIANNLENHSSSVLDVDSTVQLKEGCSECLCSEQPVEVSKNEVVVLPKSGEIGDKIVETHDSSSMLVKGDDSLEGTAVNICDSDERIPSSPVLEIDSLAQITEGQGPIVSSGNQEHLLEDDGHKLECGVSVCNTETSLLKVEDNKLLETEFDFSSNSHIGSPSILMAEICSSTNITHETQATEDIENGHNGLGVQCDNDTSEDHVSISVNVESYQTCSSSSVIEPSDVCNIHKDVPVIEKENERMTSGSGNNESENAGSLVMDKCIASLSHGQCTAEADVVVHVSKSDPLIGNESGDGKSSLCVGNFTRLEKREESVTETLTGPSLLVTNECSSMPSEPVSISEDEKPASCDGVGEQLPESFSQSSLSTETVGTNFHNEPEAVVADKVNQDHFGELETQPSIDDSVLKENNGAGDTRISAEKCKESFSKTTGRNPDHGQNLTQTEMPSIEVSSHNVGLKDKEEKKSNLVAGGNNDQQNILVHAKDVPVNGSEVSFKPAADFQDHPLGVGDSIPGSDECNCGSPIVISSSELTQNNKEKQEGQNGSLDQNACVSDSVEEQGCKMGSSANDLKGNDATENDRSFTFEVSAQADLPDRETDRGWRPFPSIQPYEFPQAVEGSPTTYGLSQMDPKVLQETSQGNHQASEVEDLRASSKGTPEPKSRRRSGKATDREAAKDGKSLKDPPRQTKDRGGNSCNVSSSSRGTLSQAVQGEEMRSYGYIEGSVAKPCGVPTVQTSTLPDLNNSASPSLLFLQPFTDLQQVQLRAQIFVYGSLIQGTAPDESCMVAAFGDSVLNFTDGGRSLWDNVWHASLERLHNQKCLHSNPETPLPSHLGSRVSEQSSRQSSLQSKTLCTPSRSGGKGNPSATINPAIPLSPPLWSISAPSRDGLQPSSSLLDASQAISPLHPYQSPHIRQFVGNTSPWLSQAPSAVPWIVSPPTSVLDASAHYSAFPISQPGQTSIRELSVPQTSGMQHSPLSSSVPSGGPGPLLEAKRTTVSPSKNGSADPRLRKRKKNLASEEDGSISLVAQPQTGSVSAAVVTSVATITPAVSTAKVVTANLTASSTSLTQHQIIGGQDLDQRVIFSKESCSKIEQAKQQAEEAAALAATAVRHNQSIWSQLNVQKTSGLISDVEVKLASAAVAVAAAASVAKAAAAAAKVATDAALQAKQMADEALLSRGTGHHAQTTEASFSDSVKNMGMVTPASILKCRDKIDSSSSIIFAAKEAARKRVQAASAATKRAENLDAVVKAAELAAEAVSQAGTIIAMGDPIPLAMNDLVEAGQDGHWKVQQVSSEKFSKSSNTNEGQSNLDCVGEGLDNSASHLNEQSSRKQETERVTDPGKLSSKELSRPLVENHMGLVNGVRSSEKGLGGQKGRKASESAKAIGIVSESEIGSRFGSVPFQNKDHEGNHSARSSKESSIKEGSVVEVLSDKDGFRRAWFAAKVLSLKDGQAYVCYTEVLPDEGFGQLEEWVPLEGEGDIPPRVRIAHPRTAMKFEKTRKRRRAAIVDYAWSVGDRVDAWKRDGWWEGIITEKSKEDETSLTVHFPAQGDTLVVKAWHLRPSLFWKDGQWIEWSRSREDNPYVHEGDSPQEKRPKLGRHGAETDVAVEVSGIDNTGKPEEARPLALSANEKMFTVGKSTKEGNSSDAPRTKRTGLQKEGSRVVFGVPKPGKKRKFMEVSKHYIVDKGGQTTEVNDSIKFTKYLIPQGSGPRGWKNTWKIDSAGKQASKSKPKLLKSGRTGRNNSEKDSSSMSVISVSKDGTVHGHTKASVSHDEHMSEKKNQLEHCSLSDNNKAAEDSTLFSSVARASDAPSSKKKSSSIETTLRTKGKAAPSGQKLARSEEKDAGQYDNTAKQVPDVIEPRRSNRRIQPTSRLLEGLQSSYIISKIPSAPHDKNTKTQHRSAPSSRGNNHS 2262
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01114 2262 CDD Tudor-Agenet-FMRP-like-rpt2 1863 1911 - -
Nenu6g01114 2262 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 12 2262 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 1642 1731 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 997 1038 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 1642 1676 - -
Nenu6g01114 2262 Pfam Agenet domain 1773 1836 IPR008395 -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 2153 2262 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 2153 2179 - -
Nenu6g01114 2262 CDD Tudor-Agenet-AtDUF-rpt1-3 1770 1839 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 682 712 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 252 276 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 1747 1773 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 2220 2236 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 936 1059 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 2060 2135 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 1314 1331 - -
Nenu6g01114 2262 Coils Coil 1441 1461 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 1039 1059 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 969 996 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 1354 1368 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 879 899 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 1987 2006 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 1677 1692 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 2093 2114 - -
Nenu6g01114 2262 Coils Coil 1573 1593 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 1170 1218 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 261 276 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 1929 1952 - -
Nenu6g01114 2262 SMART agenet-At-2 1859 1917 IPR014002 -
Nenu6g01114 2262 SMART agenet-At-2 1768 1823 IPR014002 -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 1314 1373 - -
Nenu6g01114 2262 MobiDBLite consensus disorder prediction 2115 2135 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01114 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:17974691 Nenu6g01114 Nenu-Chr6:38049063 wgd