AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01130 ATGAAGAAAGGGAAAGGAGTAGCAATAATATCGAATCCTCCTGCAAGTGGAGAAGACGCAGATGAGAAGGGCGAATTCTCCCTGCCCCCCGGCAGATTTTCTTCCCGAAATGCTTCTTCCAAATACGATTTTGTTAAGGTAAAGGTATGGCTTGGCGATAATGCGGATCACTACTACGTTCTCTCTAGATTTCTCCTTAGTAGAATGTTGACTGTCACTAAGATCCCTAATCATGTTGCTATTAAAATTGCTCTCGAACTGAAAAAACTGCTTATAGACAACAGCCTTCTAGATGTATCCCAATCTGATTTGGAGGCTAATCTCTTTAAGCTTATGGAGCGACGGGGATATGGGGAAGAATACATAAATCGTTATAAAATGATGACCAGATTTCACCATCAAAGAGTACCATTGGTGATTCTTGTCTGTGGAACTGCTTGTGTTGGGAAATCAACCATTGCTACCCAGCTTGCACAAAGGCTAAACTTGCCAAATGTTTTACAGACCGACATGGTATATGAATTGCTACGGACATCAACAGATGCTCCATTGGCATCTACCCCTGTATGGGCACGAGATTTTGGTTCTTCTGAGGAATTCATCACCGAGTTTTGTAGAGAATGCAGAATTGTTCGTAAAGGTTTGGCTGGTGACTTAAAGAAGGCAATGAAAGATGGAAAACCCATTATAATTGAGGGAATCCATTTGGATCCAAGTATTTATTTAATGGATGATGAGAATAGAGAACCAACTAATTTACCTGCAAAAAAAGAAGAGCCAAAACCTCTCCCTGTTACCAATGTGGATGATGATGCAAAACAAAAGGAATGCGATACAACAAATAATACTTGTGGAGTCCCCAATGAGACTAGCAGCTGTATTGCTGGAAATGTTGAAGAAGTTTCAGGTTGTTTGAAATCTCTTGATTTGTCAGGAAGCTCTTCTGAGAGGCAAGGTGAAGCTCTTAAAGGTCCAGGAGTAATTTCCAGTCACCTTGTGAAGAAAGAAAAAACAACTCCTGAACCAGTAATTATACCCATAGTTCTGAAGATGGCTGAGTTTGATCACAAGGCGTTACTGGAGGAGTGGATATCCACTCGTACATTTGGTGATAAATGTCTAGCCCAGGTTCAAGATAAGCTCATAAGCAACTTAAAGATGATTCAAGATTATTTATGCTCATTTGAGTCACAGGGTTTGACAGTGGTCAATATTTCAGCAACAACATTCCCACAAACACTGGATTGGCTGCATGGGTATCTTCTTCAGTGTATCGAGCGAGGTATTTCTTCTACATCCACTGGGCCAGTGACTCAAACAAATGCAAATTAG 1332 40.69 MKKGKGVAIISNPPASGEDADEKGEFSLPPGRFSSRNASSKYDFVKVKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKIALELKKLLIDNSLLDVSQSDLEANLFKLMERRGYGEEYINRYKMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLASTPVWARDFGSSEEFITEFCRECRIVRKGLAGDLKKAMKDGKPIIIEGIHLDPSIYLMDDENREPTNLPAKKEEPKPLPVTNVDDDAKQKECDTTNNTCGVPNETSSCIAGNVEEVSGCLKSLDLSGSSSERQGEALKGPGVISSHLVKKEKTTPEPVIIPIVLKMAEFDHKALLEEWISTRTFGDKCLAQVQDKLISNLKMIQDYLCSFESQGLTVVNISATTFPQTLDWLHGYLLQCIERGISSTSTGPVTQTNAN 443
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01130 443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 243 IPR027417 -
Nenu6g01130 443 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 28 428 - -
Nenu6g01130 443 MobiDBLite consensus disorder prediction 246 269 - -
Nenu6g01130 443 Gene3D - 139 255 IPR027417 -
Nenu6g01130 443 MobiDBLite consensus disorder prediction 1 25 - -
Nenu6g01130 443 Pfam AAA domain 140 239 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01130 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:18377403 Nenu6g01130 Nenu-Chr6:38473590 wgd