AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01133 ATGGGTTCATCCCCAATTCCAATTTCCCCAAGAAAACTTCGCTCTGATCTCTACACCTTCTCGTCCCAAGAAGATTCGACTTCAAGCACCCCTTTGGTCATCTCTGTTCTTGCTTCTCTCCTCGAGAGAACCATTGCTAGGAATGAACGGATTTCGGGAAAATGCAGATGGGCATTGCCGAAAGATGCTAGAATTCATGTCTTCGAATGCTGCCAGGTGCCAAACATGACAATTCAGTCCTTTCTCGAGAGGATTTTTCGCTACACTAGGGTTGCTTCCCCAGTTTACGTCGTTGCCTATGTCTACATTGATCGCTTGTGCCAGATCCAGCCTGAGTTTCGCATCACCTCAAGCAATGTATATAGGCTTCTCATCACCACCATCATGGTGGCCTCCAAATTTGTTGAAGACATGAATTATAGGAATTCGTACTTTGCGAAGGTTGGGGGATTAACGACCAAGGAGATGAACAAATTAGAGGTTGATTTTCTATTCTTGATGGGTTTCAGATTGCACGTTAATGTAAGCGTGTTTGAGAGCTATTGCTGTCATCTAGAGAGGGAAGTTAGCATAGGAGGAGGATACCAAATAGAGAGGACTCTGAGGTCCATGTGTTCCGGAGATATCAAATCCGAAGGAGGAGGGGAAGAAAATGATCTCAACCAGCTTGCGCGTGTTATCCGATGCAGCTCATATTAG 699 45.21 MGSSPIPISPRKLRSDLYTFSSQEDSTSSTPLVISVLASLLERTIARNERISGKCRWALPKDARIHVFECCQVPNMTIQSFLERIFRYTRVASPVYVVAYVYIDRLCQIQPEFRITSSNVYRLLITTIMVASKFVEDMNYRNSYFAKVGGLTTKEMNKLEVDFLFLMGFRLHVNVSVFESYCCHLEREVSIGGGYQIERTLRSMCSGDIKSEGGGEENDLNQLARVIRCSSY 232
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01133 232 Pfam Cyclin 33 171 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Nenu6g01133 232 SUPERFAMILY Cyclin-like 80 172 IPR036915 -
Nenu6g01133 232 Gene3D - 21 206 - -
Nenu6g01133 232 PANTHER UNCHARACTERIZED 24 203 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Nenu6g01133 232 PIRSF PREG 9 229 IPR012389 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01133 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr6:35500016 Nenu6g01133 Nenu-Chr6:38645934 dispersed
Nenu Nenu-Chr6:38645934 Nenu6g01134 Nenu-Chr6:38661676 tandem
Nenu Nenu-Chr1:18565321 Nenu6g01133 Nenu-Chr6:38645934 wgd