AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01134 ATGGATTCATCTTCAACCTCAATTTCCCCAGCTAAGCTTCGATCTGATCTCTATTCCTTCGCATACCAAGACGAGTCCAACAGCCCACTGGTGATTTCGGTTCTTGCTTCCCTCATGGATAGAACCATGACGAGAAACGAAAGAATTACAGGAAAATGTAACTGGGTGTTGTCCAAAGATTCCAGAATCCGTGTTTTCGATTGCCATCAGGTACCAGACATGACAGTTCAGTCTTTTCTTGAGAGAATCTTCCGCTACACTCGCGTTGGACCGCCGGTTTATGTCGTCGCATATGTTTACATCGATAGACTGTGCCAAATGCATCCCCAGTTTCGAATCACACCCAGCAATGTACACAGGCTTCTCATTACAACCATCATGGTGGCTTCTAAATTCATCGAGGACATGAACTACAGGAACTCTTACTTCGCAAAAGTTGGAGCACTGACGACCAGAGAGATGAACAAATTAGAGATGGATTTTCTCTTCTTGATGGGTTTTAAGCTGCACGTAAACGTGAGTGTGTTCGAGAGCTACTGTTGTCATCTGGAGAGAGAAGTGAGCATAGGAGGAGGATACCACATAGAGAGGACTCTGAGGCTTATGTGTTGTGGTGAAATCAAGGCCAAGCATAGAGAGGAAGATGGCTTCAACAATCAGCTTGGCCGTGTTATCGGATGTGGTTCACATTAA 693 45.02 MDSSSTSISPAKLRSDLYSFAYQDESNSPLVISVLASLMDRTMTRNERITGKCNWVLSKDSRIRVFDCHQVPDMTVQSFLERIFRYTRVGPPVYVVAYVYIDRLCQMHPQFRITPSNVHRLLITTIMVASKFIEDMNYRNSYFAKVGALTTREMNKLEMDFLFLMGFKLHVNVSVFESYCCHLEREVSIGGGYHIERTLRLMCCGEIKAKHREEDGFNNQLGRVIGCGSH 230
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01134 230 SUPERFAMILY Cyclin-like 78 170 IPR036915 -
Nenu6g01134 230 Pfam Cyclin 31 169 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Nenu6g01134 230 PIRSF PREG 5 222 IPR012389 -
Nenu6g01134 230 PANTHER UNCHARACTERIZED 15 190 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Nenu6g01134 230 Gene3D - 21 202 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01134 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:18565321 Nenu6g01134 Nenu-Chr6:38661676 dispersed
Nenu Nenu-Chr1:18573939 Nenu6g01134 Nenu-Chr6:38661676 dispersed
Nenu Nenu-Chr6:38645934 Nenu6g01134 Nenu-Chr6:38661676 tandem