AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nenu6g01141 | ATGGATCTTTCCGCTCTCACAGAAGCTCAACAGCAACAGCTCCAACAATTCCATCAACAGCTTCAACAGCAACAAGAACAACAGCAGCAGCAGCAGCAGCAAATTCAACAACAACAGCAGGACTACTACGATCCGTCTCAAACCCAAGCTTACGATCAATCAACCCAGGCCTACTACCCTTACCACCATTATCAGCAACAGCAACACTATGCTTACTATCATCCGGATTACGCTAACGCCTATCAGCAACCGCAACAACAACAACAACAACCACAACCGTCAGCGGCGCAGGCGGACTCCACACCGATCCAACCTCCCGGCATTTCGATCCCAGCTGAAGCTTCCCAACTATTGGCTGCCGCTGCTGCCGCGGCAGCGGCTCAAGGGCAGCAACAAGGACAAGTTCACGGGCAATCGCAAGGGCAAGTGCAAGCGCATGTTCAGCAGCAACAGAATGCTTATTATCCGCAAGGCGTTGGGGAGCAGCAGCAGGCTGCAAATTCGTCCTATCCAGTTCCACCCGGGCTGAACCCTGCGGCCGCGGCGGCGGTCGCTGCATTGTCGCAATTGACGCACTTTGCAGGAACGATGGATGCTGCGGAGAGAGCTATGGCAGGGTTGCAAGAACGGCAGTGGCACACGAAGAATGGAGGCTATGGACACATGCCGCCGCCCGGGTCTATGCCTTATGGACCACATGGACCTTTTCCGATGCGCCCACCGGTTGGGAGATCAGCATACAGGGGTGGTGGTAGAAGAGGTGGCGGGTCATTCAGAGGTGGTGGTAGAGGTAACTTTGGCCAACGTCAACCTCGAGCAGATGGATCAGGTCACCATTTCCGCGGGAGGGGACGCATGGGGAAGGGTGGTAGACGCTTTCAACAACATGCTGCATCATCATCAGCATCAGGCCAGGAACCTGCAGCACTGACACAAGGAGAAGCTGATGTACAAGGAGAGGCACTACAAGCTGAACGACAGCTGCAATCAGTTCCAGCTCAACCTCCAGTATCAGCTCCAGTACCAGGACAGTCAGCTCCAAACCGACGTCCCCCTCAAATTGCATGGTGTGAGCTTTGTAGGGTTGACTGCACCAGTTTAGATATCCTTGAGCAGCACAAGAATGGAAAGCGCCATAAGAAGAACTTGCAGAGAATTGAAGAGTTAAAGAATGCCAAAAAACCTTTGCCTGCAATACAGGTCGAGCAAAAACCTCTGCCTGCATTGAAGTCTGAGAGTATGGTGCAGCCTGCTAGTGTGCAGGAGATCCAGCCTGACAATGTCCAGGGGATGCAGCCTGAAAATATCCAGGGGGCACAACCTGAGAATGTTGAGGGTTTGCAGGCTGACAATATGCAGGGCATTCAAGCAGAGCATGTTGAGGGAGTGCAGTCTGAGAATGTCCTTGAGGCAGGGCCTGACAATGTCCAGGAAGGACAGCCTGAGAATGTCCAGGGAGCAGGGGAGAGCAAACCACCTATTGCAGAAAATTTGCCTACTGAAGCTCCTAGTAATGAAAACAAGATAGAAATTGAGCAGCAAAATAGTTCGGTAGAACAACCTGGGACTGCTGATGTTGAAAGGGCTGAAGCACCTGGAAAGAGGCAGAGGTTTGGTCGATTTGATTCTCGTAGGCGTGGTATCAAACGCAAGATGAGAGGAGGGGGTCGAGGAGGTAAGCGCACGAGGACTTCTGAAGGGCCAAGGAAGCCGGTTGAGCCTCCCAAACCAAAAGAGGTGGTCCCCTTAATCTGTGACTTGTGCAATGTCAAGTGTGACACACAGACTGTTTTTGACTGTCATTTGGCTGGTAAAAAGCACCTATCTAAGCTTAAACGGTTCCAAGGTCATCAGGCAATGTTTGGACCTGTAGGACTTCAGGCCCTTTACCCTCCCAGTCCCAGTGCTCATTCAACTTTTGTCATCACACAAGGACATCAACAAGCCTTCTACAGCCCTCATGTCTTCCTTCCACAGCAGGCTGCTTATAGGCCTCCTCAAGCTCAACAGGTGGCTGCAGCAAGTTCACAACCCCAAGTTCAACCATCGGAGTCTCAAGTAACAGATGTTACATTGGAATCAGGAAACCAGATTGCTGTTGCCGTTGAACCTAAAAATCGACAGTCTGTTGTAGTCGAGATGGGAAACCAACAAGGCCATATGGTGGAAGCCATATCTGAGAAAATTCCAGAATCAGGGGGAATGGAGGTTGGCTCTTCCCTGGATAACTTGGTTGTGCCGGCATCAGGTAATGGTGATACAAGGGGTAACCAAACTCCTTCAGTGAAGGACGATTCTGGTCCTGTGTCTGATATGGGGTTGCCTCAACCAAATACATGCGAGGATTCACAACCATGA | 2358 | 51.36 | MDLSALTEAQQQQLQQFHQQLQQQQEQQQQQQQQIQQQQQDYYDPSQTQAYDQSTQAYYPYHHYQQQQHYAYYHPDYANAYQQPQQQQQQPQPSAAQADSTPIQPPGISIPAEASQLLAAAAAAAAAQGQQQGQVHGQSQGQVQAHVQQQQNAYYPQGVGEQQQAANSSYPVPPGLNPAAAAAVAALSQLTHFAGTMDAAERAMAGLQERQWHTKNGGYGHMPPPGSMPYGPHGPFPMRPPVGRSAYRGGGRRGGGSFRGGGRGNFGQRQPRADGSGHHFRGRGRMGKGGRRFQQHAASSSASGQEPAALTQGEADVQGEALQAERQLQSVPAQPPVSAPVPGQSAPNRRPPQIAWCELCRVDCTSLDILEQHKNGKRHKKNLQRIEELKNAKKPLPAIQVEQKPLPALKSESMVQPASVQEIQPDNVQGMQPENIQGAQPENVEGLQADNMQGIQAEHVEGVQSENVLEAGPDNVQEGQPENVQGAGESKPPIAENLPTEAPSNENKIEIEQQNSSVEQPGTADVERAEAPGKRQRFGRFDSRRRGIKRKMRGGGRGGKRTRTSEGPRKPVEPPKPKEVVPLICDLCNVKCDTQTVFDCHLAGKKHLSKLKRFQGHQAMFGPVGLQALYPPSPSAHSTFVITQGHQQAFYSPHVFLPQQAAYRPPQAQQVAAASSQPQVQPSESQVTDVTLESGNQIAVAVEPKNRQSVVVEMGNQQGHMVEAISEKIPESGGMEVGSSLDNLVVPASGNGDTRGNQTPSVKDDSGPVSDMGLPQPNTCEDSQP | 785 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nenu6g01141 | 785 | MobiDBLite | consensus disorder prediction | 559 | 576 | - | - | |
| Nenu6g01141 | 785 | MobiDBLite | consensus disorder prediction | 214 | 315 | - | - | |
| Nenu6g01141 | 785 | SUPERFAMILY | beta-beta-alpha zinc fingers | 576 | 614 | IPR036236 | - | |
| Nenu6g01141 | 785 | Pfam | Zinc-finger of C2H2 type | 356 | 379 | IPR013087 | - | |
| Nenu6g01141 | 785 | Pfam | Zinc-finger of C2H2 type | 584 | 607 | IPR013087 | - | |
| Nenu6g01141 | 785 | MobiDBLite | consensus disorder prediction | 730 | 785 | - | - | |
| Nenu6g01141 | 785 | Gene3D | Classic Zinc Finger | 340 | 385 | - | - | |
| Nenu6g01141 | 785 | Gene3D | Classic Zinc Finger | 565 | 614 | - | - | |
| Nenu6g01141 | 785 | MobiDBLite | consensus disorder prediction | 500 | 522 | - | - | |
| Nenu6g01141 | 785 | MobiDBLite | consensus disorder prediction | 539 | 558 | - | - | |
| Nenu6g01141 | 785 | MobiDBLite | consensus disorder prediction | 225 | 239 | - | - | |
| Nenu6g01141 | 785 | SUPERFAMILY | beta-beta-alpha zinc fingers | 332 | 386 | IPR036236 | - | |
| Nenu6g01141 | 785 | SMART | ZnF-U1-5 | 356 | 386 | IPR003604 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
| Nenu6g01141 | 785 | SMART | ZnF-U1-5 | 580 | 614 | IPR003604 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
| Nenu6g01141 | 785 | MobiDBLite | consensus disorder prediction | 329 | 349 | - | - | |
| Nenu6g01141 | 785 | MobiDBLite | consensus disorder prediction | 461 | 577 | - | - | |
| Nenu6g01141 | 785 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
| Nenu6g01141 | 785 | MobiDBLite | consensus disorder prediction | 82 | 104 | - | - | |
| Nenu6g01141 | 785 | MobiDBLite | consensus disorder prediction | 82 | 109 | - | - | |
| Nenu6g01141 | 785 | MobiDBLite | consensus disorder prediction | 294 | 308 | - | - | |
| Nenu6g01141 | 785 | MobiDBLite | consensus disorder prediction | 744 | 765 | - | - | |
| Nenu6g01141 | 785 | Coils | Coil | 7 | 41 | - | - | |
| Nenu6g01141 | 785 | PANTHER | OS06G0651300 PROTEIN-RELATED | 13 | 652 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nenu6g01141 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nenu | Nenu-Chr3:91340404 | Nenu6g01141 | Nenu-Chr6:38987187 | dispersed |