AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01147 ATGAAATTCGGGAAGAGACTGAAAAACCAAATTCAAGAAACTTTGCCCGAGTGGCGGGATAAGTTCTTGTCTTACAAGGATATGAAGAAGCTTGTCCGGCTCATCTCTTCTGGGCCGTCGACATCCGAGGAATTGCCCGACTCCGGGAAGGCGGAAGCAGAGTTTATTTACCTCCTGAATTCCGAGATCGACAAGTTCAATTCGTTCTTTGTGGAGCAAGAAGAGGACTTCATAATCCGCCATAGAGAGCTAAAACAGAGGATCCAAAAGGTGATTACCACATATGGACCAAATGGAGCTCAACCTTCAGAGGTGGATTATAATAAGGAGATGGGGAGGATCAGAAAAGACATAATCAACTTCCATGGAGAAATGGTGTTGTTGGAAAACTATAGCAATATCAATTACACAGGGTTGGCTAAGATATTGAAGAAGTACGACAAGCGGACTGGAGGTTTGTTGCGATTACCATTCATTCAGAAGGTGTTGCAGCAACCTTTCTTCACAACCGACCTTGTATCAAAGCTTGTTAAAGAATGTGAAGACACAATAGATGCAGTGTTTCCCGTTAAGGATGAAGAGGGTAGAAGAGAAGAAAAAGGGGAGAGAAAAGTAGCAATGTTACCTGGTCAGAGCATTTTCAGGAATACCGTTGCTGCTCTAGTTACCATGCAAGAGATGAGAAAGGGGAGCTCTACATACAGTCACTTTTCACTTCCTCCTCTCAACTTGACAGACTCAAATTATTCAGTCCTTCCAACTTGA 765 43.14 MKFGKRLKNQIQETLPEWRDKFLSYKDMKKLVRLISSGPSTSEELPDSGKAEAEFIYLLNSEIDKFNSFFVEQEEDFIIRHRELKQRIQKVITTYGPNGAQPSEVDYNKEMGRIRKDIINFHGEMVLLENYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVLQQPFFTTDLVSKLVKECEDTIDAVFPVKDEEGRREEKGERKVAMLPGQSIFRNTVAALVTMQEMRKGSSTYSHFSLPPLNLTDSNYSVLPT 254
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01147 254 ProSiteProfiles SPX domain profile. 1 160 IPR004331 -
Nenu6g01147 254 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 246 IPR031142 GO:0016036(InterPro)
Nenu6g01147 254 Pfam SPX domain 1 35 IPR004331 -
Nenu6g01147 254 Pfam SPX domain 103 161 IPR004331 -
Nenu6g01147 254 CDD SPX-AtSPX1-like 2 149 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01147 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr4:31747485 Nenu6g01147 Nenu-Chr6:39135416 transposed
Nenu Nenu-Chr8:14717948 Nenu6g01147 Nenu-Chr6:39135416 transposed
Nenu Nenu-Chr1:19201868 Nenu6g01147 Nenu-Chr6:39135416 wgd