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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01148 ATGGCGGGAGAAGGAACCTGCATATTCTGTCAGATCGCTCGTTCTTCCACTTCTACCACTCTCCTCCACTCCGATGAGAAGGTCGTTGCCTTTCAAGATATCAGGCCTTCTGCGTTCAGGCATTATCAGGTGATTCCTGTGGAGCACATTTCAACTATCAATGACCTCCAAAGGAGAGAGGAAGATTATCTTTTGGTAAGTCACATGCTGAGTGTGGGGAAATCTCTACTACACAGAGATGCACCTCAGTCCATTGAGTACAGGTTTGGCTTTCATGCCCCTCCATTCAACAGCGTTAACCATCTCCATCTCCATTGTTTGGCACTTCCTTTCATACCCAAATGGAAACATGTAAAATACATGTCTTTGGGACCTCTGGGATTCATCAAGGCTGAGAAGTTGATGGAGAAGATAAAGCCATAA 423 45.39 MAGEGTCIFCQIARSSTSTTLLHSDEKVVAFQDIRPSAFRHYQVIPVEHISTINDLQRREEDYLLVSHMLSVGKSLLHRDAPQSIEYRFGFHAPPFNSVNHLHLHCLALPFIPKWKHVKYMSLGPLGFIKAEKLMEKIKP 140
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01148 140 ProSiteProfiles HIT domain profile. 8 120 IPR011146 GO:0003824(InterPro)
Nenu6g01148 140 PRINTS Histidine triad family signature 97 107 IPR001310 -
Nenu6g01148 140 PRINTS Histidine triad family signature 29 47 IPR001310 -
Nenu6g01148 140 PRINTS Histidine triad family signature 8 24 IPR001310 -
Nenu6g01148 140 PANTHER APRATAXIN-RELATED 6 139 - -
Nenu6g01148 140 SUPERFAMILY HIT-like 4 127 IPR036265 -
Nenu6g01148 140 Gene3D - 1 113 IPR036265 -
Nenu6g01148 140 Pfam Scavenger mRNA decapping enzyme C-term binding 7 117 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01148 K22966 sulfate adenylyltransferase (ADP) / adenylylsulfatase [EC:2.7.7.5 3.6.2.1]