AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01187 ATGGAAAAGAAACCAAAACCTCCGTCCCTCCGGCACCGTCTGACCCACCTAGACACCACATTGTCCCTCCACATCCACACCATATGCCAACCATTTCCCCGTCCCCTTCTCAAAGCCCTCGAGATCAGTGGCGATGGCTTGTTCTGGATTCCGATCCCTATCGCTCTCTTCTTCACCCCTCTCGCTTCGAAATCCGTTCATGTGCGGTTCCTCCTCGTTGGTCTCTTCATCGGTTTCTTATTCGACCTTATCCTAGTCGGCCTCATCAAGTATCTGGTCCGTCGGCCTCGCCCCGTCTACAATACGGGTATACATCTTACCTTCTCCGTCGATCATTGGTCTTTCCCTAGTGGTCACTCCTCTAGGGTTTGCTTCATCGCCGCTTTTTTGTATCTTTCCATGGAGACGGTTTACCAAGCTGTGGTTCAATTGAAGTCTTCTGGAAATAGATTTTTTAGTGAAACGATCGATCCTGACGGTAAGACCGTTGAACTCTTCTTCTTGTCTACTTGCTTGTGGTCAGCAGCGACGTCGGTTTCTAGGGTTTTGCTTGGTCGACATTTTGTTTTTGATGTAATTGCTGGTGCTTGCGTGGGTGTTTTTGAGGCTTTTGTAGTGTACTATGTTATGAACTTCTTGAATTTGGAATTGTGA 654 47.86 MEKKPKPPSLRHRLTHLDTTLSLHIHTICQPFPRPLLKALEISGDGLFWIPIPIALFFTPLASKSVHVRFLLVGLFIGFLFDLILVGLIKYLVRRPRPVYNTGIHLTFSVDHWSFPSGHSSRVCFIAAFLYLSMETVYQAVVQLKSSGNRFFSETIDPDGKTVELFFLSTCLWSAATSVSRVLLGRHFVFDVIAGACVGVFEAFVVYYVMNFLNLEL 217
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01187 217 Pfam PAP2 superfamily 73 212 IPR000326 -
Nenu6g01187 217 SMART acid-phosph-2 70 207 IPR000326 -
Nenu6g01187 217 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 5 210 - GO:0042392(PANTHER)
Nenu6g01187 217 Gene3D Phosphatidic acid phosphatase type 2-haloperoxidase 101 216 - -
Nenu6g01187 217 SUPERFAMILY Acid phosphatase-Vanadium-dependent haloperoxidase 6 212 IPR036938 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01187 K22904 presqualene diphosphate phosphatase [EC:3.1.3.-]