AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01191 ATGATGAAATCCTTCCTTTCTGACATGGCAACACCGGTTCTTCACGGGTTAGTCATGCCGACAGCCATCGCCACCAAAAGCTCGCGCAAGGTCGCCGTGATCGGTGCCGGCGCAGCTGGCCTCGTGGCGGCTAGAGAGCAGCGCAGAGAAGGCCATAACGTCGTAGTCTTCGAACGGAGCGATCGGGTCGGAGGGACTTGGGTCTACGACGCCAACGTCGAATCCGATCCAATGGGACTCCACCCTTCTCGGGCCATCATCCACTCCAGTCTCTACGACTCTCTGCGTACCAATCTCCCTCGGCAAGTCATGGGCTTTCTCGATTTCCCGTTTGTTGTCAGAGATGGAAAAGACAGGGACCCTCGAAGGTTTCCCGGCCACCGAGAGGTCTTACTCTATCTGGAGGATTTCGCGCGACATTTCGAACTCACTGGATTGATACGGTTTGACACTGAGGTGTTTCATATTGGTCTGGTAGAGGAAGGAAAGTGGATACTAAGGTCCCGCAAGAGAACTCGAACTGATACTGATGCCCAGGACGATTTGTGGATCGAAGCGGGTGAGATTTATGATGCTGTTGTTGTATGTAACGGGCACTATACAGAACCCCGAATTGCGGAAATTCCAGGTGTTGAAACTTGGCCAGGGAAACAAATGCATAGCCACAATTATCGCATTCCTGAGCCATTCCGTGATCAAGTTGTGGTTTTGATAGGAAGTTCTGCTAGTGCTGTTGACATTTCCATGGACATTGCTGTTGTTGCCAAAGAAGTTCATATTTCTTCAAGATCTGCAACTCCTGGAGAAATTGGAAAGCTGGCTGGATATGATAATATGTGGCTTCATTCTATGGTTGAAAGAACTCAAGAAGATGGCACAGTGGCATTCCAAGATGGGAGTTTTGCCCATGTTGATGTCATTCTGCACTGCACAGGGTACAGATATCATTTTCCTTTTCTGGAGATGAGGAATATCCTTAGTGTGGATGACAATCGTGTAGGACCACTATACAAGCACATATTTCCTCCATCTTTAGCTCCATGGCTCTCCTTCATTGGACTACCTTTTATGGTTGTTCCTTTCCCTTTGTTTGAATTACAAAGCAGGTGGGTAGCGGGTATTTTATCAGGTCGGTTTACACTTCCATCAGAAGAAGAAATGATGGAAGATGTGAAGGACTTCTATTCAAAGATTGAATCTGCTGGCTGGCCCAAGCGATACACTCATAAGATGGGAGATTCCCAGTTTGTGTATAATGACTGGCTTGCCACCCAGTGTGGATGTTCAGGCATAGAGGAATGGAAAATTCAGATGTATCATGCCAATCGAAAGAACAGGGTAGACCGACCAAAAACATATCGTGATGTATGGGATGATGAACATCTGATTCTACAAGCAGATGAATACTTTCGTCAGTACTCAAATGGAGGTAACATGTGA 1440 47.08 MMKSFLSDMATPVLHGLVMPTAIATKSSRKVAVIGAGAAGLVAAREQRREGHNVVVFERSDRVGGTWVYDANVESDPMGLHPSRAIIHSSLYDSLRTNLPRQVMGFLDFPFVVRDGKDRDPRRFPGHREVLLYLEDFARHFELTGLIRFDTEVFHIGLVEEGKWILRSRKRTRTDTDAQDDLWIEAGEIYDAVVVCNGHYTEPRIAEIPGVETWPGKQMHSHNYRIPEPFRDQVVVLIGSSASAVDISMDIAVVAKEVHISSRSATPGEIGKLAGYDNMWLHSMVERTQEDGTVAFQDGSFAHVDVILHCTGYRYHFPFLEMRNILSVDDNRVGPLYKHIFPPSLAPWLSFIGLPFMVVPFPLFELQSRWVAGILSGRFTLPSEEEMMEDVKDFYSKIESAGWPKRYTHKMGDSQFVYNDWLATQCGCSGIEEWKIQMYHANRKNRVDRPKTYRDVWDDEHLILQADEYFRQYSNGGNM 479
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01191 479 Gene3D - 207 310 IPR036188 -
Nenu6g01191 479 Pfam Flavin-binding monooxygenase-like 282 401 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Nenu6g01191 479 Pfam Flavin-binding monooxygenase-like 29 265 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Nenu6g01191 479 SUPERFAMILY FAD-NAD(P)-binding domain 283 462 IPR036188 -
Nenu6g01191 479 PIRSF FMO 276 434 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Nenu6g01191 479 PIRSF FMO 27 268 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Nenu6g01191 479 SUPERFAMILY FAD-NAD(P)-binding domain 27 264 IPR036188 -
Nenu6g01191 479 Gene3D - 30 455 IPR036188 -
Nenu6g01191 479 FunFam Flavin-containing monooxygenase 207 310 - -
Nenu6g01191 479 PRINTS Flavin-containing monooxygenase (FMO) signature 233 248 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Nenu6g01191 479 PRINTS Flavin-containing monooxygenase (FMO) signature 297 324 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Nenu6g01191 479 PRINTS Flavin-containing monooxygenase (FMO) signature 362 375 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Nenu6g01191 479 PRINTS Flavin-containing monooxygenase (FMO) signature 53 77 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Nenu6g01191 479 PRINTS Flavin-containing monooxygenase (FMO) signature 29 45 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Nenu6g01191 479 PANTHER DIMETHYLANILINE MONOOXYGENASE 28 458 IPR050346 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01191 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:19925905 Nenu6g01191 Nenu-Chr6:39865514 dispersed