Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Nenu6g01193	ATGAAACTAGCTTGGCGTTGTCTGATTGAACAAGACAGGCTATGGGCCAAACAATTAAAACTAAAGTACTTGATCTCTGGCGAATCTTTTTGGAGTGTCAAGCCTAAAGGATCATCTTCCCACATCTGGAAGTGTCTTCTTAACTCAAGGGAGGATTTAAGAAAGGGAACACGAATGCTGATCTCAAACGGATGGGACACAAACATCTTCAATGATCCGTGGATTCCAAACTTCATTCTTAACAGAGATGACTCTCAATCCAATGGGAAAGTTGCAGATGTCATTGACTTTGACTATGAGGCCTTGGATTTCAGAGAAGGAATTCAAATGGCCAAGGATTTACAAATCTCTCATGTTTGGATTGAAGGTGATACTAAAAAGGTTGGTATTTCTTCTCTTCCCCACTGGCTTGAGGTCCTTCTCGGAGAGAAGTTCTTTAATCCTTGTTTGGTTCATGAGTCTGCAAAGAAGAACGAGAAAAACATTTTCTGCTTGGATTGTTGCACTAGTATATGTCCTCACTGCTTATCTCCTCACCGTTCTCATCGGCTCTTACAGATAAGAAGGTATGTTTACCATGACGTTATACGGCTGGATGATATCGAAAAATTAATCGATTGCGCCTTTGTTCAATCGTACACGACGAACAGCGCAAAGGTGGTATTTTTAAACCAGAGGCCCCAGTCTCGGCCTTTTAGAGGCTCCGGCAGCATCTGCAGCACCTGCGACAGGAGCCTGCAAGACCCATATCTCTTCTGTTCTCTCGCCTGCAAGGTTCATCATCTGGCGAGGAGCGAAGGTGGACTGTCGAAGTATCTTTTCGAGTGCGAATTCCTTCCATTACCGGAAGGAGGAAAAGGAGAGAGCTGTTGCGAACTGGAGGATGGGCAAATGACGCCCAGCTCGGTACTGGAATCGCCAATTTCTTTACACACCTCATCCGGGTCCAGCGCAAGTGGTGGTGGTGGTGGCGTGGGTTGCAGGACCCTTGCCTGCACTGCTACGACGGAGTTCGTGAAGAAAAAGCGGACCAGCATTTCGGTTTCAAGGACGACGTATCGGCCGACATGTTCACGCGCGTCGGAAATCTCAATCAGTAACAGGCGAAAGAGTATCCCCCACCGGTCGCCACTTTATTGA	1140	46.75	MKLAWRCLIEQDRLWAKQLKLKYLISGESFWSVKPKGSSSHIWKCLLNSREDLRKGTRMLISNGWDTNIFNDPWIPNFILNRDDSQSNGKVADVIDFDYEALDFREGIQMAKDLQISHVWIEGDTKKVGISSLPHWLEVLLGEKFFNPCLVHESAKKNEKNIFCLDCCTSICPHCLSPHRSHRLLQIRRYVYHDVIRLDDIEKLIDCAFVQSYTTNSAKVVFLNQRPQSRPFRGSGSICSTCDRSLQDPYLFCSLACKVHHLARSEGGLSKYLFECEFLPLPEGGKGESCCELEDGQMTPSSVLESPISLHTSSGSSASGGGGGVGCRTLACTATTEFVKKKRTSISVSRTTYRPTCSRASEISISNRRKSIPHRSPLY	379

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Nenu6g01193	379	CDD	Bbox2	149	187	-	-
	Nenu6g01193	379	PANTHER	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	131	378	-	-
	Nenu6g01193	379	Pfam	PLATZ transcription factor	188	259	IPR006734	-
	Nenu6g01193	379	ProSiteProfiles	Zinc finger B-box type profile.	149	187	IPR000315	GO:0008270(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Nenu6g01193	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Nenu	Nenu-Chr1:18222712	Nenu6g01193	Nenu-Chr6:39920385	dispersed
	Nenu	Nenu-Chr1:100087391	Nenu6g01193	Nenu-Chr6:39920385	dispersed
	Nenu	Nenu-Chr2:28594376	Nenu6g01193	Nenu-Chr6:39920385	dispersed
	Nenu	Nenu-Chr3:77807253	Nenu6g01193	Nenu-Chr6:39920385	dispersed
	Nenu	Nenu-Chr4:53874936	Nenu6g01193	Nenu-Chr6:39920385	dispersed
	Nenu	Nenu-Chr5:59935492	Nenu6g01193	Nenu-Chr6:39920385	dispersed
	Nenu	Nenu-Chr6:39920385	Nenu7g01727	Nenu-Chr7:54846919	dispersed
	Nenu	Nenu-Chr1:18225568	Nenu6g01193	Nenu-Chr6:39920385	transposed
	Nenu	Nenu-Chr1:20272466	Nenu6g01193	Nenu-Chr6:39920385	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Nenu	PLATZ	8.2e-27	No_clan		TF	PLATZ