AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01196 ATGTCAGTCTCCTTGCCTTCTACTTCATCGGCTCTCTTCGCCGTCTCACCTCTTCAGGAGGGGAATTGCAGCTTTCCGATTCGATCTTCTACGGCGAATTTTATTTTCAAGCTTCACAGGACATACCCTCAGCTCCGTGCTTCAAGCAGCAATGCTTCATCTATCGAGACTGGTTTGAGCACTGAATTAGATGCTGTTTCGAGCTTCAGTGAGATCGTTCCAGATACTGTCATTTTCGATGATTTCGAGAAGTTTCCACCAACTGCTGCAACTGCCAGTTCTTCGCTCCTTTTAGGCATATGCAGTCTTCCGGATACGATATTCAGGAGCGCTGTAGAAACTGCTCTGGCGGATTCAGAGTGTTATGGGCAAAAAGATCCCGGCGTTCGAATGTCCTGCTTCCTTAACAAGGCTTTAGTTAATGTTGGAGGTGACTTGTCGAAACTAGTTCCTGGTAGGGTGTCGACTGAAGTGGATGCTCGCCTGGCTTATGATACTCATGGCATTATTAGGAAGGTGCATGATCTTTTGAAGTTATACAATGAGCTAGGGGTCTCTCCAGAGCGTCTGCTATTCAAAATTCCTTCAACATGGCAAGGAATAGAGGCCTCACGGGTGCTGGAGTCTGAAGGCATACAAACACACTTGACCTTTGTTTACAGCTTCTCTCAAGCTGCAGCTGCAGCACAAGCCGGGGCTTCTGTTATCCAGATATTTATTGGTCGTCTTAGGGATTGGGCACGCAATCATTCTGGTGATCCCGAGATAGAAGCTGCTTGCAGAAGAGGAGAAGATCCTGGTTTGGCTTTGGTGACCAAAGCATACAATTATATTCACAAATATGGATTTAAATCAAAGTTAATGGCAGCTGCAGTTCGAAACAAGCAGGATATATTCAGCCTCCTGGGGGTTGACTACATTATTGCACCATTGAAGATATTGCAGTCACTCAAAGAATCCATTACCTCCCCTGATGAGAAGTATTCTTTTGTGAGGAGTCTATCTCCACAATCCGCTGCAGCTTACAATTTCAGTGAAGAGGATCTTGTTAAGTGGGATCAGTTGAGCTTCGCATCGGCTATGGGGCCTGCTGCTGAAGAGCTTCTGGCTGCTGGATTAGAAGGTTATGTTAATCAGGCGAAGCGTGTAGAGGAATTATTTGGTAAGATATGGCCACCACCAAACGTGTGA 1191 45.93 MSVSLPSTSSALFAVSPLQEGNCSFPIRSSTANFIFKLHRTYPQLRASSSNASSIETGLSTELDAVSSFSEIVPDTVIFDDFEKFPPTAATASSSLLLGICSLPDTIFRSAVETALADSECYGQKDPGVRMSCFLNKALVNVGGDLSKLVPGRVSTEVDARLAYDTHGIIRKVHDLLKLYNELGVSPERLLFKIPSTWQGIEASRVLESEGIQTHLTFVYSFSQAAAAAQAGASVIQIFIGRLRDWARNHSGDPEIEAACRRGEDPGLALVTKAYNYIHKYGFKSKLMAAAVRNKQDIFSLLGVDYIIAPLKILQSLKESITSPDEKYSFVRSLSPQSAAAYNFSEEDLVKWDQLSFASAMGPAAEELLAAGLEGYVNQAKRVEELFGKIWPPPNV 396
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01196 396 FunFam Transaldolase B 60 390 - -
Nenu6g01196 396 Gene3D Aldolase class I 60 390 IPR013785 -
Nenu6g01196 396 SUPERFAMILY Aldolase 60 391 - -
Nenu6g01196 396 CDD Transaldolase-TalAB 61 387 IPR004730 GO:0004801(InterPro)|GO:0005737(InterPro)|GO:0006098(InterPro)
Nenu6g01196 396 PANTHER TRANSALDOLASE 61 391 IPR001585 GO:0004801(PANTHER)|GO:0005622(PANTHER)|GO:0005975(InterPro)|GO:0009052(PANTHER)
Nenu6g01196 396 Pfam Transaldolase-Fructose-6-phosphate aldolase 107 384 IPR001585 GO:0005975(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01196 K00616 transaldolase [EC:2.2.1.2]