AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01214 ATGGCGGCCAAAGAAGAAATCCAAACAAGAGACGATCCGGTTGCAGCAACAGCTGAAGAAGACGATGAGCACGATTCCAAGGAGAGAGTTCTCCAGAGGTACTTTCTCCAAGAGTGGAAGCTACTCAAGTCTCTCCTAGACGACATCGTCGCCAATGGCCGTGTCTCCGATCCCTCTGCTGTAAACAAGATCCGCACCATCCTAGATAAGTACCAAGAACAGGGTCAACTTTTAGAGCCTTACTTAGAGACCATTATTTCTCCACTGATGTTTATAGTCCGCTCAAAAACTGTTGCATTGGGGGTTGTCACAGATGAAATTCTTGAGATAATCAAGCCTTTGTGCATTATTATTTATTCCCTTGTTACTGTATGTGGATACAAGTCTGTCATCAAGTTTTTCCCACATCAGGTCTCTGAATTAGAACTTGCTGTCTCTCTTTTGGAGAAGTGCCATCATGCAACTGTAGTGACATCATTGCGGCAAGAAAGTACTGGGGAAATGGAGACAAAATGTGTCATACTTCTATGGCTCTCAATACTTGTTTTGGTTCCTTTTGATATCTCTTCAGTGGATACTAGTATTGCAAGCAGTGGCCTTGTGGGTGGACTTGAACCCTCTCCTTTGGTGCTGAAAATACTAGGGTTCTCTAAAGATTACCTTTCAAGTGCTGGCCCAATGCGTGCCATAGCTGGGTTACTGCTCTCGAGGCTTCTAACGCGACCAGACATGCCTAAAGCCTTTTCAAGTTTCATTGAATGGACACATGAAATTTTATCTTCTGCAACAAACGATGTCATGGATCACTTTCGGTTACTTGGTGTTGTGGAAGCACTAGCAGCCATTTTCAAGGTTGGTAGTCGTAAAGTTTTGCTTGATCTAGTTCCTGTTGTTTGGAATGACACCTCAATCTTGGTTAAGTCCAATACTGCAGTTCGGAGTCCTCTTCTACGCAAGTTTTTGGTGAAGTTAACTCAGCGAACTGGGCTTGTTTGCCTTCCTCCTCGATCCCCATCATGGCAATATGTGGGGAAAAGCAGTTCATTAGGGGAGAATGTAACTGACAAACATGATGTATGCAATAATGAACGGAATGCAGATTCCTTTTATTCAAAAGAAAGTGCATGTTCTGTGCAAGAAGGTGATATGGATGTTCCAGAAATCATAGAGGAGATTATTGAGTTGCTATTGTCAGGATTGAGAGATACGGATACTGTTGTCCGCTGGTCTGCAGCAAAAGGTATTGGACGTATAACTGCACGTTTAACATCTACCCTTTCAGATGAAGTGCTGTCATCTGTATTGGAACTTTTCTCACCTGGCGAGGGAGATGGTTCATGGCATGGAGGTTGCTTAGCCCTTGCTGAGCTGGCTCGCAGAGGATTACTCTTACCTATTAGTCTTCCTAAAGTTGTTCCTGTTATCATCAAGGCACTACATTATGATATTCGAAGGGGTCCACATAGTGTTGGATCCCATGTGCGTGATGCTGCTGCCTATGTTTGTTGGGCATTTGGTCGTTCATACTTCCACTCAGATATGAAAAACATTTTGGAACAACTTGCTCCGCACCTATTAACAGTAGCCTGTTATGACCGTGAGGTTAATTGCAGGAGAGCTGCTGCAGCCGCTTTTCAGGAGAATGTTGGAAGACAGGGGAGTTTTCCACATGGCATTGAAATAGTTAATACAGCGGATTATTTCTCACTCTCCTCACGAGTAAACTCATACCTTAATGTTGCTGTAAACATTGTGCAGTATAAGGAGTATCTTCATCCTTTTGTTGAAGAGCTTCTATGTAGTAAGATTTGTCACTGGGATAAAGGCTTGAGAGAACTTGCTGCAGAGGCGCTTTCTGCTCTTGTGAAGTATGATACTGGATATTTTGCATCATTTGTTCTGGAACGTTTGATTCCCTGTACTCTCTCAACTGATTTGTGCATGCGTCATGGTGCAACCTTAGCTGTTGGGGAACTTGTTTTGGCTCTACATCAATGTGATCATTTGCTTTCCACTGATAAGCAGAAATCTGTTGCTGGTATTGTTCCTGCAATTGAGAAAGTGCGTCTTTATCGTGGAAAGGGTGGAGAAATAATGCGCTCTGCTGTTTCTCGTTTCATTGAGTGTATATCTCTCAGTCATATATCCTTACCACAAAGAATCAAACAAAGTTTGCTTGGTACCCTTAACGAGAATCTGAGACATCCCAATGCTCAGATCCAGAATTCTGCTGTTGAAGCCCTAAAACACTTTGTCCCAGCATACCTTGTCATGGTAGATGATGGGAATGCTGATAGTATAACATCCAAGTATCTGGATCTCTTGTCAGATCCTAATGTTGCAGCAAGGCGTGGATCAGCATTGGCATTAGGTGTCCTGCCTTTCAAGTTGCTGGCTGCAAAGTGGACGGTTGTGATATCAAATCTTTGTAGATCTTGTGCAATTGAGGATAATCCTGATGATAGAAATGCTGAAGCCCGTGTAAATGCAGTTCGAGGGCTTGTATCTGTTTGTGAAACATTAAGTTCTACCAGGAAACATTCTCAATTCCTTTCTGTTGATGATGACATGTCTCTTTGTCTTATGATAAAAAGGGAAGTTATGCAGACATTATTTAAAGCACTTGATGACTACTCTGTAGATAACAGAGGTGACGTGGGTTCTTGGGTCCGAGAAGCTGCCATGGATAGCCTTGAAAGATGTACATATATCCTTTGTGAAAGAGAATCTGAGGGCTTCCCGAGGAAGACAACAGGGATCGAATATAAAGAACATCCAGATAATGACATTGCTGAAAGGGATCAGGGACACACACTTTTTGATGTAAGTCTTGCAACCAGCTTAGTTGGAGGGTTTGTAAAGCAAGCTGTTGAGAAGATTGATAAAATAAGAGACATTGCAGCAACTATTCTTGGGAGGATTTTGCACAATGAAAGAATTTTTGTTCCGTGCATAACTTATCGGGAAAAGCTGGAAGAAATTGTTCCCAATCATCCAGACTTAAAGTGGGGAGTACCAACTTTCTCTTACCCACGCTTAGTTCAGTTGCTTCAATTTAGTTGTTACAGCAGATTTCTGATTTCTGGGTTAGTTATCTCTATTGGGGGATTGCAAGATTCCCTGCGGAAGGCATCAATCACAGCTTTATTAATGTATCTTCAAGATACTCTAGCTGACAAACATGAAGGATGCTCGAGAGAGCATATGTTAGGTGATGATCTCCTTTGGGTCCTCCAACAGTATAGAAGATGTGACAGGGTCATTATACCCACACTGAAGACCATTGAGATTCTTTTCAGCAAAAAGATCCTCCTGAACATGGAGGCTAAGACTCTGGATTTTTGTGTTGGTGTTTTGGACTCCTTGGCTATTGAATTGAAGGGATCAAGGGACTTCTCCAAGTTATATGCAGGCATTTCTATTCTTGGTTATGTTGCTTCTGTTTTAGATCCCATCAATATTCAGGCTTTTTCTCAGCTTCTTACTTTTCTTGGTCATCGATATCCAAAGATACGGAAAGCATCCGCTGATCAGGTCTATCTTGCCTTGTTGCAAAACGAGAATCTCGTGGCAGCAGGGGACAAAAGGGAGAAGGCACTTGAGATCATTTCTGAAACTTGTTGGGAAGGTGACATAGAGGAAGCAAAACACCAAAGGTTACAACTGTATGAGATGGCTGGTATGGAAGCCAGTAAACTTTTGAAGACCAACAGAGAAGCAAACAAGGATAATAAGAAATCCGTAGCTGATGAGAATGCATCATATTCGTCACTAGTTGGTTCATCTGGGTTCTGA 3795 42.29 MAAKEEIQTRDDPVAATAEEDDEHDSKERVLQRYFLQEWKLLKSLLDDIVANGRVSDPSAVNKIRTILDKYQEQGQLLEPYLETIISPLMFIVRSKTVALGVVTDEILEIIKPLCIIIYSLVTVCGYKSVIKFFPHQVSELELAVSLLEKCHHATVVTSLRQESTGEMETKCVILLWLSILVLVPFDISSVDTSIASSGLVGGLEPSPLVLKILGFSKDYLSSAGPMRAIAGLLLSRLLTRPDMPKAFSSFIEWTHEILSSATNDVMDHFRLLGVVEALAAIFKVGSRKVLLDLVPVVWNDTSILVKSNTAVRSPLLRKFLVKLTQRTGLVCLPPRSPSWQYVGKSSSLGENVTDKHDVCNNERNADSFYSKESACSVQEGDMDVPEIIEEIIELLLSGLRDTDTVVRWSAAKGIGRITARLTSTLSDEVLSSVLELFSPGEGDGSWHGGCLALAELARRGLLLPISLPKVVPVIIKALHYDIRRGPHSVGSHVRDAAAYVCWAFGRSYFHSDMKNILEQLAPHLLTVACYDREVNCRRAAAAAFQENVGRQGSFPHGIEIVNTADYFSLSSRVNSYLNVAVNIVQYKEYLHPFVEELLCSKICHWDKGLRELAAEALSALVKYDTGYFASFVLERLIPCTLSTDLCMRHGATLAVGELVLALHQCDHLLSTDKQKSVAGIVPAIEKVRLYRGKGGEIMRSAVSRFIECISLSHISLPQRIKQSLLGTLNENLRHPNAQIQNSAVEALKHFVPAYLVMVDDGNADSITSKYLDLLSDPNVAARRGSALALGVLPFKLLAAKWTVVISNLCRSCAIEDNPDDRNAEARVNAVRGLVSVCETLSSTRKHSQFLSVDDDMSLCLMIKREVMQTLFKALDDYSVDNRGDVGSWVREAAMDSLERCTYILCERESEGFPRKTTGIEYKEHPDNDIAERDQGHTLFDVSLATSLVGGFVKQAVEKIDKIRDIAATILGRILHNERIFVPCITYREKLEEIVPNHPDLKWGVPTFSYPRLVQLLQFSCYSRFLISGLVISIGGLQDSLRKASITALLMYLQDTLADKHEGCSREHMLGDDLLWVLQQYRRCDRVIIPTLKTIEILFSKKILLNMEAKTLDFCVGVLDSLAIELKGSRDFSKLYAGISILGYVASVLDPINIQAFSQLLTFLGHRYPKIRKASADQVYLALLQNENLVAAGDKREKALEIISETCWEGDIEEAKHQRLQLYEMAGMEASKLLKTNREANKDNKKSVADENASYSSLVGSSGF 1264
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01214 1264 ProSiteProfiles HEAT repeat profile. 392 429 IPR021133 -
Nenu6g01214 1264 Gene3D - 577 978 IPR011989 -
Nenu6g01214 1264 Pfam Tubulin folding cofactor D C terminal 947 1134 IPR022577 -
Nenu6g01214 1264 MobiDBLite consensus disorder prediction 1250 1264 - -
Nenu6g01214 1264 SUPERFAMILY ARM repeat 380 976 IPR016024 -
Nenu6g01214 1264 Gene3D - 366 553 IPR011989 -
Nenu6g01214 1264 PANTHER BETA-TUBULIN COFACTOR D 5 1236 IPR033162 GO:0000226(PANTHER)|GO:0005096(InterPro)|GO:0005096(PANTHER)|GO:0006457(PANTHER)|GO:0007021(InterPro)|GO:0007023(InterPro)|GO:0048487(PANTHER)|GO:0048487(InterPro)
Nenu6g01214 1264 MobiDBLite consensus disorder prediction 1 25 - -
Nenu6g01214 1264 MobiDBLite consensus disorder prediction 1240 1264 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01214 K21767 tubulin-specific chaperone D