AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu7g00121 ATGTTAGACTTGGATACTGGAGAAGTGGAGAGTACAGACATGCACGAACAGGAGAAAGGACATCAGCAGATGCGTCGTGGCCGTGCTTGCCCATCTCCTCCCCTGATAAATCTGTACCTTCTACATGGAACTATCATTGCAGCTCAAGAAAATCAAGATGCTGAATTCAATATAGTTGTTAAGGAACTAGAGAAAGCAAATCAAAAAGCCTTTGCACTCTCATCCTTTCCGATCTCTAATGGTTCTTCGGTCTACGAACTCCTACCCGAGTTCGGGCTACCGAGTGGCCTCCTGCCTGATTCGGTTAAAGGCTTTTCTCTCGCCGACGATGGAAGGTTCGTTGTCGAATTGGAGAAGCCCTGTTACATCCAGTTCGACTACTTGGTTTACTACGATCAGAAAATCACCGGTACGCTCAACTACGGGTCAATCGCGAATCTCAAGGGGATTGAAGTCAAACGTTTCTTCTTGTGGTTTGACGTCGAAGAGATCCGGGTAGATTTGCCGCCGGCCGATTATATATACTTTCAAGTGGGGTTTATCAACAAGAAGCTTGACGTTGACCAGTTTCAGACGGTGCATTCTTGCCAGGATGGGGTGTCGTGCAAAGGAGGATCTTGGAAAGATCTTTTGAAGGTGCCAACTCCTATTAATGAAGTTCCAATGTTAATCACGGAGTAG 681 46.26 MLDLDTGEVESTDMHEQEKGHQQMRRGRACPSPPLINLYLLHGTIIAAQENQDAEFNIVVKELEKANQKAFALSSFPISNGSSVYELLPEFGLPSGLLPDSVKGFSLADDGRFVVELEKPCYIQFDYLVYYDQKITGTLNYGSIANLKGIEVKRFFLWFDVEEIRVDLPPADYIYFQVGFINKKLDVDQFQTVHSCQDGVSCKGGSWKDLLKVPTPINEVPMLITE 226
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu7g00121 226 MobiDBLite consensus disorder prediction 8 25 - -
Nenu7g00121 226 PANTHER T31J12.3 PROTEIN-RELATED 75 196 IPR007493 -
Nenu7g00121 226 Gene3D - 66 201 IPR036758 -
Nenu7g00121 226 MobiDBLite consensus disorder prediction 1 27 - -
Nenu7g00121 226 SUPERFAMILY At5g01610-like 75 197 IPR036758 -
Nenu7g00121 226 Pfam Protein of unknown function, DUF538 84 191 IPR007493 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu7g00121 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr2:106280397 Nenu7g00121 Nenu-Chr7:2180076 dispersed
Nenu Nenu-Chr7:2168066 Nenu7g00121 Nenu-Chr7:2180076 tandem