Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nenu7g00856 | ATGGAAGTGAAAACCAAGAGAAGAGCTGTTGCTGAGAGTGCAGATACTGGAGAAGGCTTGGTTCTTCTCACTTCAATTGGGAATGGAGAGGATTTGGGTCCTATTGTCAGGCATGCTTTTGAAATGGGGAAGCCAGAGTCTCTCTTGCATCAACTCAAGAGTGTTGTAAAGAAAAAGGAAGTTGAAATTGAGGAGCTATGCAGGCTCCACTATGAGGAATTCATCCTTGCTGTTGATGAGCTCCGGGGTGTCTTGGTCGATGCCGAAGAGTTGAAGGGTGAACTTTCAAGTGACAACTTTCGGCTACAGGAGATTGGGAGCTCTTTGCTTTTGAAACTTGAGGAGCTCCTTGAGTCATACTCAATCAAGAAGAATGTCACTGAAGCTATAATGATGTCAAAGAACTGTGTTGAAATCCTATACCTCTGTGTGAAGTGCAATGAGCATGTAAGTGAAGGTCGGTTCTATCCTGCTATTAAGACTCTTGACAAAATAGAGAAAGATTTCTTGCAAGATGTTCATGCAAAGACCTTGAGAAGGGTGATTGAGAAGAGAATACCAGCAATAAAATCACATATTCAGAAGAAGGTATGTACTGAGTTCAATGAGTGGTTGGTTCATATAAGGAGCAAAGCTAGGGAAATTGGACAAACAGCCATAGGACAGACTGCATCAGCTCGTCAAAGGGAAGAAGAGATGAGGGCTCGTCAGAGGGAAGCTGAGGAGCAAAGCCGTGCAGGGTTAGGTGACTGTGTATATATGCTAGATGTTGAGGAGATAGATGAAGAGTTAATTCTCAAGTTTGATCTTACTCCTGTCTATAAGGCATTCCACATTCATCGTTGTCTTGGGATCCAAGACCAATTTCGAGACTATTACTATAACAATCGGATGATGCAACTCAATCTGGACTTACAGATATCATCAGCACAACCATTTCTTGAATCCCATCAAACATTCCTAGCTCAAATTGCAGGGCACTTCATAGTGGAGGACCGTGTCCTACGTACTGCTGTAGGGCTATTGTCCTCTAATCAGGTGGAGACCATATGGGAAGCGGCTATTTCTAAGATCACATCACTACTGCAGGAACAATTTTCTCGTATAGATACAGCAAGCCATCTGCTTCTGATCAAGCACTATGTGACTCTTGTGGGAGTGACTCTGAAACACTATGGCTACCAAGTTAGTCCCTTACTAGAGGTTCTTGACAACAGTAGGGACAAATATCATGAGCTTCTGTTAGAGGAGTGTGAGCGCCAAATGGTTGATGTTCTTGCAAATGATACTTATGAGCAGATGGTAATGAAGAAAGAATACGAGTACAACAAGAATGTTTTGGCATTTCATCTCCAAACCTCAGATATAATGCCAGCTTTCCCTTACATTGCACCCTTCTCGTCCACTGTTCCTGATGCTTGTCGCATTGTTCGATCATTCATTGAGGATTCTGTGAGTTACTTATCTTATGGGGGCCGCATGAATTTCTATGATGTTGTGAAGAAATACCTTGACAAGCTGTTAATAGATGTGTTGAATGAAGCTCTGTTGAGAACCATCTACAGTGGTACAACTGGTGTTTCCCAAGCAATGCAGATTGCTGCCAACATAGCTGTTCTTGAGAGGGCTTGTGATCTCTTTGTGCAGCAGGCAGCTCAACATTGTGGGGTCCCTGTTCGAACAATTGAGAGGCACCATTCTAGTTTAAATGCCAAGGTGGTTCTGAAGACATCAAGAGATGCAGCTTATCATGCTCTGTTGAACCTTGTTAACTCTAAATTAGATGAGTTCATGGCACTAGAGAGTATCAATTGGACGACAGAGGAGGTTCCACAGAACCCAAATGACTATGTAAATGAAGTGGTGATATACCTCGACACTGTCTTGTCCACAGCTCAGCAAATCTTGCCTTTGGATGCCTTATTCAAGGTTGGCACTGGGGCACTTGAGCACATCTCCAACTCAATCGTCACAGCTTTTCTATGTGACAGTGTGAAGAGGTTCAATGCAAATGCCGTCATGGGCATTGATATTGACCTGAAGGTGTTTGAGAATTTTGTAGATGACAGGTTCTATACCACTGGACTGATTGAGATGACCAAGGAAACTAGGCTAAGAGATTTCTTGATAGAATCTCGACAACTGGTTAACCTTTTATTAAGCAACCAGCCAGAGAATTTCATGAATCCAGTGATAAGGGAGAAATACTACAATGCACTAGACTATAAAAAGGTTGCTACCATTTGTGAGAAGTTTAAAGATTCTCCTGATAGGTTGTTTGGAAGCCTTTCAAATCGAAACCCAAAGCAAAATGCTCGAAGGAAGTCTATGGACATGCTAAAGAAAAGATTGAAGGATTTCAATTGA | 2367 | 42.29 | MEVKTKRRAVAESADTGEGLVLLTSIGNGEDLGPIVRHAFEMGKPESLLHQLKSVVKKKEVEIEELCRLHYEEFILAVDELRGVLVDAEELKGELSSDNFRLQEIGSSLLLKLEELLESYSIKKNVTEAIMMSKNCVEILYLCVKCNEHVSEGRFYPAIKTLDKIEKDFLQDVHAKTLRRVIEKRIPAIKSHIQKKVCTEFNEWLVHIRSKAREIGQTAIGQTASARQREEEMRARQREAEEQSRAGLGDCVYMLDVEEIDEELILKFDLTPVYKAFHIHRCLGIQDQFRDYYYNNRMMQLNLDLQISSAQPFLESHQTFLAQIAGHFIVEDRVLRTAVGLLSSNQVETIWEAAISKITSLLQEQFSRIDTASHLLLIKHYVTLVGVTLKHYGYQVSPLLEVLDNSRDKYHELLLEECERQMVDVLANDTYEQMVMKKEYEYNKNVLAFHLQTSDIMPAFPYIAPFSSTVPDACRIVRSFIEDSVSYLSYGGRMNFYDVVKKYLDKLLIDVLNEALLRTIYSGTTGVSQAMQIAANIAVLERACDLFVQQAAQHCGVPVRTIERHHSSLNAKVVLKTSRDAAYHALLNLVNSKLDEFMALESINWTTEEVPQNPNDYVNEVVIYLDTVLSTAQQILPLDALFKVGTGALEHISNSIVTAFLCDSVKRFNANAVMGIDIDLKVFENFVDDRFYTTGLIEMTKETRLRDFLIESRQLVNLLLSNQPENFMNPVIREKYYNALDYKKVATICEKFKDSPDRLFGSLSNRNPKQNARRKSMDMLKKRLKDFN | 788 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nenu7g00856 | 788 | MobiDBLite | consensus disorder prediction | 219 | 242 | - | - | |
| Nenu7g00856 | 788 | Coils | Coil | 223 | 243 | - | - | |
| Nenu7g00856 | 788 | Gene3D | Dsl1p vesicle tethering complex, Tip20p subunit, domain D | 578 | 727 | IPR042044 | - | |
| Nenu7g00856 | 788 | Gene3D | - | 395 | 569 | IPR042045 | - | |
| Nenu7g00856 | 788 | FunFam | Exocyst complex component | 396 | 564 | - | - | |
| Nenu7g00856 | 788 | FunFam | Exocyst complex component | 578 | 727 | - | - | |
| Nenu7g00856 | 788 | PIRSF | Sec15 | 1 | 788 | IPR007225 | GO:0006886(InterPro)|GO:0090522(InterPro) | |
| Nenu7g00856 | 788 | MobiDBLite | consensus disorder prediction | 227 | 242 | - | - | |
| Nenu7g00856 | 788 | Pfam | Exocyst complex subunit Sec15 C-terminal | 398 | 751 | IPR046361 | - | |
| Nenu7g00856 | 788 | Coils | Coil | 49 | 69 | - | - | |
| Nenu7g00856 | 788 | PANTHER | SEC15 | 14 | 787 | IPR007225 | GO:0000145(PANTHER)|GO:0006886(InterPro)|GO:0006887(PANTHER)|GO:0006893(PANTHER)|GO:0016020(PANTHER)|GO:0090522(InterPro) | |
| Nenu7g00856 | 788 | Pfam | Exocyst complex component EXOC6-Sec15, N-terminal | 51 | 220 | IPR048359 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nenu7g00856 | K19985 | exocyst complex component 6 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nenu | Nenu-Chr4:16056556 | Nenu7g00856 | Nenu-Chr7:17946915 | transposed | |
| Nenu | Nenu-Chr5:61583755 | Nenu7g00856 | Nenu-Chr7:17946915 | transposed | |
| Nenu | Nenu-Chr2:80640862 | Nenu7g00856 | Nenu-Chr7:17946915 | wgd |