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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu7g00882 ATGAAATTCAGGAGTGTAAATCGTTGTTCGGTTTTAGCGTCATCTCTACTGCTTCTCTTCTCTGCATTTTCTGAATTTAGGCTTTGTTTCGCGAATCCCAAAAGGATGGAACGCGAGGGAGTAATCCTCGGCGGAATACACGATTCCGTCGGGTTTGAGAACAGCGTCGAGATTGAAGACCTTGCTCGATTCGCTGTCGATGAACACAACAAGAAACAGAATGCGCTGCTGGAGTTTGGGAGGGTTGTGATGGCGAAGGAGCAGGTGGTTGCCGGAATGATGCACCACCTGACTCTGGAGGTGATTGAGGCGGGTAAGAAGAAACTCTGTGAAGCCAAGGTGTGGGTGAAGCCATGGATGAACTTCAAGGAGCTGCACGAATTCAGGCTGGTTGGAGATGCCCCCACTGTCGCTTCGTCGGATCTCGGTGCCAAGCGTGGTAAATGA 447 50.56 MKFRSVNRCSVLASSLLLLFSAFSEFRLCFANPKRMEREGVILGGIHDSVGFENSVEIEDLARFAVDEHNKKQNALLEFGRVVMAKEQVVAGMMHHLTLEVIEAGKKKLCEAKVWVKPWMNFKELHEFRLVGDAPTVASSDLGAKRGK 148
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu7g00882 148 FunFam Cysteine proteinase inhibitor 40 138 - -
Nenu7g00882 148 CDD CY 44 128 IPR000010 GO:0004869(InterPro)
Nenu7g00882 148 PANTHER CYSTATIN FAMILY MEMBER 18 135 IPR027214 GO:0004869(PANTHER)|GO:0004869(InterPro)
Nenu7g00882 148 SMART CY-4 41 131 IPR000010 GO:0004869(InterPro)
Nenu7g00882 148 ProSitePatterns Cysteine proteases inhibitors signature. 87 100 IPR018073 -
Nenu7g00882 148 Pfam Aspartic acid proteinase inhibitor 57 129 IPR000010 GO:0004869(InterPro)
Nenu7g00882 148 SUPERFAMILY Cystatin-monellin 40 133 IPR046350 -
Nenu7g00882 148 Gene3D - 27 134 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu7g00882 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr7:18692057 Nenu7g00882 Nenu-Chr7:18704481 tandem