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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu7g00899 ATGGCCACCGCCAGCTTCTCTTTATCCCCTTCACCGTTCTCTCGTTCAGATTTTCGTCCAAGCTCCACCCAAGCGCGCCTTCGGATTCCCTGCCGTTCGGATGGAACCTCGTTGTCTCCTCTCTCCAGAACCCTTTCGGCAATTGAAAGCTCCGGTGTCATTGCGTGTCTTCGCGCCTCAAGTGGAGATCTGGCAAGGGAAGCTGCACAAGCTGCACTTAGTGGTGGCATCTCAGTTCTGGAGATTGTGATGTCCACTCCAGGTGTGTTTGAGGTTTTAGAAGGACTAGTTCAGGACCATCCTACATCGATAATAGGAGTTGGGACTGTCTTAAATGCCTTGGATGCCAGAAAAGCCATAAAAGCTGGAGCCAGGTTCCTCATGAGCCCTGTAACAGTCAAGGACATTCTTGAAGATATCCAAGGTGGTGAAATTCTCTATATCCCTGGAGTAATGACACCAACAGAGTTATGGGCTGCATATAATTCTGGTGCAAGAGTTGTAAAGGTTTATCCTATCTCAGCCTTAGGTGGCACTCAATATATATCATCTCTCAAGAAACCATTTCCTCATATCCCAATGGTTGCTTCCCAAGGCATCACATTAGATTCTATAGGAACATATATTGCTGGTGGAGCATCAGCAGTGGTTTTGTCTGATGCTATATTTGATAAAGAGGCAATGTGTCAACAAAATTTTGATACCATCTATCAACTTGCTCAACTTGCAGCTTTACAAGGACATGAAGCAGTACAACGGAAGAAAAGATGTATGCTCAGTCTTGCTTCATGA 792 45.58 MATASFSLSPSPFSRSDFRPSSTQARLRIPCRSDGTSLSPLSRTLSAIESSGVIACLRASSGDLAREAAQAALSGGISVLEIVMSTPGVFEVLEGLVQDHPTSIIGVGTVLNALDARKAIKAGARFLMSPVTVKDILEDIQGGEILYIPGVMTPTELWAAYNSGARVVKVYPISALGGTQYISSLKKPFPHIPMVASQGITLDSIGTYIAGGASAVVLSDAIFDKEAMCQQNFDTIYQLAQLAALQGHEAVQRKKRCMLSLAS 263
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu7g00899 263 Pfam KDPG and KHG aldolase 50 239 IPR000887 GO:0016829(InterPro)
Nenu7g00899 263 CDD KDPG-aldolase 48 239 IPR000887 GO:0016829(InterPro)
Nenu7g00899 263 Gene3D Aldolase class I 41 246 IPR013785 -
Nenu7g00899 263 SUPERFAMILY Aldolase 44 241 - -
Nenu7g00899 263 PANTHER 2-KETO-3-DEOXY-6-PHOSPHOGLUCONATE ALDOLASE 1 251 IPR000887 GO:0016829(InterPro)
Nenu7g00899 263 MobiDBLite consensus disorder prediction 1 24 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu7g00899 K01625 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]