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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu7g00935 ATGGCATCTTCTGATAACTTGGCCAGCCTCGAGCCGTGGACTTTCCGGACCTTCACCGACTCGTGGGTCTCCGACGCTTTCCTCCGTGACACCGAAACCCTAACCAAGGCTCTGCAGAAGTCTCTCTCCAACGACTCCGACACGCTAACAGTAGCAGGAGATACCAACTCGGCCGCTTCAATCTTCAACCTCATCAAGCCCGAAACCGTGCCAACACCAACGGGCTCAGGATCGGAGCCCGAAATGGCCACGAAACGCCGGAACACGGCCCCCGCCGCCACCGGAAAGATCTCAAAGCGCAAGTCCCGGGCGTCGAAGCGGTCTCCCACTACCTTCATCACGGCCGACCCCGCCAACTTCCGCCAGATGGTGCAACAGGTCACCGGCGTCCGGTTCGGCAATTCGCCCGTCCCCGGTCCCATCCTTAAACCAGAACCCCAACGTCCCGGTACCCGGTTGCAGGGCTGCTTGCCGACTCTCGACACGTCGGCGTTTCTGTTAGATCATCACCAGCAGCAGAACCAGATGGTGGGTCCAACCTCCATGCCCCAGGCCCACGTCTCGTTTGCGCCGGTGGCAAACGGTAGCACAGGTTTAGATTTCGACGCCTTCCAGAGCTTCCCGACTCTGGAGTCGTGGAGAGTAATGTAA 651 59.75 MASSDNLASLEPWTFRTFTDSWVSDAFLRDTETLTKALQKSLSNDSDTLTVAGDTNSAASIFNLIKPETVPTPTGSGSEPEMATKRRNTAPAATGKISKRKSRASKRSPTTFITADPANFRQMVQQVTGVRFGNSPVPGPILKPEPQRPGTRLQGCLPTLDTSAFLLDHHQQQNQMVGPTSMPQAHVSFAPVANGSTGLDFDAFQSFPTLESWRVM 216
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu7g00935 216 PANTHER VQ MOTIF-CONTAINING PROTEIN 6 193 IPR039609 GO:0005516(PANTHER)|GO:0005634(PANTHER)|GO:0006970(PANTHER)
Nenu7g00935 216 MobiDBLite consensus disorder prediction 66 83 - -
Nenu7g00935 216 Pfam VQ motif 107 129 IPR008889 -
Nenu7g00935 216 MobiDBLite consensus disorder prediction 66 109 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu7g00935 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:69636245 Nenu7g00935 Nenu-Chr7:20319682 dispersed
Nenu Nenu-Chr1:69636769 Nenu7g00935 Nenu-Chr7:20319682 dispersed
Nenu Nenu-Chr3:79979797 Nenu7g00935 Nenu-Chr7:20319682 dispersed