Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nenu7g01023 | ATGGGCTCCGATGCGGATATGGAGGATTATGGATTTGAGTACTCGGACGAGGAGCCAGAAGAGCAGGATGTTGACATCGAGAACCAATATTACAATTCCAAAGGTTTGGTTGAAACTGATCCTGAAGGAGCACTTGCTGGTTTTGCTGAAGTTGTTCGCATGGAACCAGAGAAGGCAGAGTGGGGATTCAAGGCTTTAAAGCAAACTGTTAAGCTCTATTATCGGCTAGGGAGATACAAAGAGATGATGGAAGCTTATAGAGTGATGTTGACATATATTAAATCAGCCGTAACACGAAATTATAGTGAAAAATGTATAAACAACATCATGGATTTTGTTTCTGGATCAGCTAGTCAGAACTTTGATCTTCTGCAAGAGTTCTATCAGACCACTCTGAAAGCCCTTGAAGAGGCAAAGAATGAGAGATTGTGGTTCAAAACAAATCTTAAGCTTTGCAAGATTTGGTTTGATATGGGTGAATATGCACGAATGAATAAGATTTTGAAGGAGCTTCACAAATCTTGTCGAAGAGAAGATGGAACTGATGATCAGAAGAAAGGAACACAGCTTTTGGAGGTTTATGCAATTGAGATTCAAATGTACACCGAGACCAAGAACAATAAAAAACTCAAGCAACTATATCAGAAAGCACTGTCAATCAAATCAGCAATACCTCATCCACGGATCATGGGGATTATTCATGAATGTGGTGGGAAAATGCATATGGCAGAACGCCAATGGGCAGAAGCAGCCACAGATTTCTTTGAAGCCTTCAAGAACTATGATGAAGCTGGAAATCAGCGACGCATCCAATGCTTGAAATACTTGGTTCTGGCCAACATGCTTATGGAATCTGAAGTTAACCCTTTTGATGGACAGGAGGCAAAGCCGTACAAAAATGATCCTGAAATTCTGGCTATGACAAATCTGATAGCAGCTTATCAACGGAATGAAATCTTGGAGTTTGAAAAGATCCTTAAGAGTAATAGAAGGACAATAATGGATGATCCTTTCATCAGAAATTATATTGAGGATCTGTTGAAGAATATAAGAACCCAAGTGTTGCTTAAGCTGATCAAACCTTATACAAGAATCCGGATTCCTTTTATATCGAAGGAGCTCAATGTGCCAGAGAAAGATGTTGAGCAGTTGCTGGTTTCATTAATTTTGGATAACCGTATTCAAGGGCACATCGATCAAGTAAACCGACTCTTAGAGCGTGGTGACAGGTCCAAGGGGATGAAAAAATATGCTGCCATAGAGAAATGGAACACACAACTTAGGTCCCTGTATCAGACTGTCAGCAACCGAATAGGATAA | 1320 | 40.15 | MGSDADMEDYGFEYSDEEPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVRMEPEKAEWGFKALKQTVKLYYRLGRYKEMMEAYRVMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFDLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYARMNKILKELHKSCRREDGTDDQKKGTQLLEVYAIEIQMYTETKNNKKLKQLYQKALSIKSAIPHPRIMGIIHECGGKMHMAERQWAEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISKELNVPEKDVEQLLVSLILDNRIQGHIDQVNRLLERGDRSKGMKKYAAIEKWNTQLRSLYQTVSNRIG | 439 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nenu7g01023 | 439 | SMART | PCI-PINT associated module | 165 | 339 | - | - | |
| Nenu7g01023 | 439 | Pfam | PCI domain | 326 | 406 | IPR000717 | - | |
| Nenu7g01023 | 439 | PANTHER | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11-COP9 SIGNALOSOME COMPLEX SUBUNIT 2 | 2 | 438 | IPR050871 | GO:0000338(PANTHER)|GO:0008180(PANTHER) | |
| Nenu7g01023 | 439 | FunFam | COP9 signalosome complex subunit 2 | 64 | 439 | - | - | |
| Nenu7g01023 | 439 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 341 | 423 | IPR000717 | - | |
| Nenu7g01023 | 439 | Gene3D | - | 64 | 438 | - | - | |
| Nenu7g01023 | 439 | ProSiteProfiles | PCI domain profile. | 243 | 412 | IPR000717 | - | |
| Nenu7g01023 | 439 | SUPERFAMILY | Winged helix DNA-binding domain | 335 | 411 | IPR036390 | - | |
| Nenu7g01023 | 439 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nenu7g01023 | K12176 | COP9 signalosome complex subunit 2 |