AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu7g01046 ATGGCGGAGAACAGAGAAACTCTTCTGAAAAAGGTGTACTACAATGGCTGCCCAGGTTGCGAGGTGGATCGGCTGAAGGAGTCGCAGCAACAAATTCCTTACAAGAAGTTCTTGTATATCTGGGTTGTATCACTCTGCACCGCTTTGCCAATCTCATCACTCTTTCCATATATGTACTTCATGATCAGAGACTTCCATATAGCAAAACGAGAGGAAGATATTGGTTTCTATGCAGGATTTGTTGGATCTTCATTCATGATTGGAAGAGCTTTAACTTCAGTTTTCTGGGGAGTGGTAGCAGATAGATATGGTCGAAAACCTGTTATATTGATTGGGACAATTTCAGTGGTTATATTCAATACACTCTTTGGCCTCAGTACAAGCCTTTGGATGGCAGTTTCTATGAGGTTTCTTCTTGGATGTTTCAATTGCATGCTTGGGCCAATAAGGGCATATGCTTCAGAAGTTTGCCATGAAAAGTATCATGCTTTAGGACAATCAATTGCTAGTACATCAAGGGGCATTGGGTTTATTATTGGTCCAGCTATAGGAGGTTTCTTTGTACAGCCTGCAGAGAAATATCCAAATATATTTTCTGATAATTCTCTGTTTGCAAGAATATTTGATTTTTTACCTTATGACTTTTGGATCTTATTGCAGGAAACATTGCATATGCATAACAGAAATAACAAGGAAGAATCATATGATGCACTGGAAGCTTCTTCACATAGATCTGATGAGAAGGAAGAAATGAAAGAAACTGAACAAACTGGGCCACCTTCCAGACTAAGCCTCTTAAGGAATTGGCCCTTAATGTCAACTATAATTGTATATTGTATTTTCTCACTTCATGAGATTGCTTATGCAGAGGTATTCTCACTATGGGCTGTTAGTGATAGAAAATATGGAGGTTTGGGCTTCTCATCTCAAAGTGTTGGTGAAGTTCTTGCAATCTCTGGTTTTGGTCTTCTGCTATTTCAGCTTTTCCTATATCCAAGTATTGAGAAATTTCTCGGGCCAATAATGGTTTCCCGCCTTGCAGCGGTTTTGTCAATTCCATTGTTGTCAAGTTATCCCTTTATAGCTCGGCTATCAGGCTTCACTCTTCAATTAGTGATAAATTGTGCTTCCATATTGAAGAATGTCCTATCTCCCCAACATCAAAGAGGAGCTGCAAATGGCATTTCGATGACCTTAATGTCTACTTTCAAAGCAATTGGTCCTGCAGGAGGAGGCTCTCTATTCTCACTAGCACAAAAGCGTCAACATGCTGCCTTCCTTCCAGGTGATCAGATAGTTTTCTTCATACTAAATGTAATTACTGCAGTTGAAGTGGTCCTGACTTTCAAACCATTTCTAACTCGGCCCTAA 1371 39.75 MAENRETLLKKVYYNGCPGCEVDRLKESQQQIPYKKFLYIWVVSLCTALPISSLFPYMYFMIRDFHIAKREEDIGFYAGFVGSSFMIGRALTSVFWGVVADRYGRKPVILIGTISVVIFNTLFGLSTSLWMAVSMRFLLGCFNCMLGPIRAYASEVCHEKYHALGQSIASTSRGIGFIIGPAIGGFFVQPAEKYPNIFSDNSLFARIFDFLPYDFWILLQETLHMHNRNNKEESYDALEASSHRSDEKEEMKETEQTGPPSRLSLLRNWPLMSTIIVYCIFSLHEIAYAEVFSLWAVSDRKYGGLGFSSQSVGEVLAISGFGLLLFQLFLYPSIEKFLGPIMVSRLAAVLSIPLLSSYPFIARLSGFTLQLVINCASILKNVLSPQHQRGAANGISMTLMSTFKAIGPAGGGSLFSLAQKRQHAAFLPGDQIVFFILNVITAVEVVLTFKPFLTRP 456
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu7g01046 456 CDD MFS-SLC46-TetA-like 40 450 - -
Nenu7g01046 456 Gene3D MFS general substrate transporter like domains 33 448 IPR036259 -
Nenu7g01046 456 ProSiteProfiles Major facilitator superfamily (MFS) profile. 36 456 IPR020846 GO:0022857(InterPro)
Nenu7g01046 456 MobiDBLite consensus disorder prediction 236 256 - -
Nenu7g01046 456 SUPERFAMILY MFS general substrate transporter 34 449 IPR036259 -
Nenu7g01046 456 Pfam Major Facilitator Superfamily 40 288 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Nenu7g01046 456 MobiDBLite consensus disorder prediction 236 260 - -
Nenu7g01046 456 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 31 450 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu7g01046 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr7:22823681 Nenu7g01047 Nenu-Chr7:22957652 tandem