AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu7g01090 ATGAGATATTCCGTCAAAGCCGGTGCAAGTATTGGAAGTTATAATAAGGATATGCTTAAAATTGGACGCAGTATTAAGTGGGCCCTATTGGTTGGGTTGGTTTCTACATGTGGAAAGCTTTCCAGCGTCTTTATCGTTGCCACTATTGAAATTTCCCGTTTCATCCACAGTCCACCGCACAGAGCTTGTGCAAAAAGGGTTCATGAAGCCATGAAAGGCTTCAACATCCCGGAATTCCTGAGAGCTTCGTTTTTCACGAAGGTCTCAGCTCTCGTTCTCATTTCCTTTGCTCTGTTTTACCTCGGAAGGCACTACTCAGATGGGTACCAACAGCTCATCTTCTTCAGCTCCCGCCAGCAAAACCCAGTTATTGCTCAAACCCCATCTGTGGCTCTTTCTCCCAACGCCAACAAAACGTTCGGTCTTGCTTCTATCACACCCAATCAAACTTTAGAGACGACGAATCCCCCTCTGCCACCACCACTGCTACTGACATTGACATTGCCGCCGCCACCACCGCCGGCTGTGGTGGATAAAACGGGGATTTTGGATGAGATTGGAACGATGTCGGAGGAATTTGAGGTAGGTGAATTTGATTCGAAGTTGATTAAGAGTTTGGGCAATTTGAGTCGACAGGATGGGAGGGGGGATGACGGAAATGGTGGCGGCAGCGGAGGAGAGTGCCGAATTGTGGCCGCTGACGGCTCTGTGGTCGTTGAACGCGACGACGCCATTAACCGATTAATGGCGGTTTCGGCCTTCAAATCAATGTCTAAGAGAGGAAGCTTGGGAACTCCTTCCACCAACTTAGCTTCTGCGGCAGAAAGTAATTCAGAGAACTTGGGTAAGAAAGTTCTGCATCGAAGGTCCAGAAGTGTGAGCGCGTTCTCGAGAAATTCTCTCGAAACACCCTCTTCGTCACAGTTGCCATCCACGGACAAAGAGGAGTTTTTGAATAAAAGAGATAATCCCCTATTCTGGAGCAGCACATCACCACCTAGAGGTTCAACTGAAACGGAAAATGTTATTGGGATCGCCAAATTCGATTCAAGTGCATCCAGATTGGGTAGACCGGCTTCGAATGTTTCAGATACTAGAAGAGGGAGATCGGTTTCGAGGAACTCCGGTTATGTGAATACGTCGTCCGGTAACCGAAAGGAAGTAGGTCGAAGTTTGTCGAGGGTAGACACGGGAAGACGCCGACGGTCAGTGTCAAGGGGTCGTTATGGGAACTCTGAGAGTGAAGTGGAACAAGATTATAATTTATCATCAAGTATAAAAACAAGAAACAACGGGAATTTGGGTCGTAGCATCGAGAAGAAAGATAATTTAATCACAAATGCTTCTGAATTGTCTGATCAAACAAAGAATATGCAAACATGGTCTAGCCAGCATCCACTTTTGGAGCCTTCTGATGGTTTGATTATTCCAAATTGGGAAGATGGAATTTCTACACGTTCATATTCAGAAGCTGAGGAGAAAACAATCAAGGCTGTTTTTGAACAGATGAAGTCTCTCCAGAGCCCTGCCAGTGATGCTGGTACAAGCGGTATATATGAGACTGTTCGATCAGAAGTGAGACGTGCTATTTCTGAGGTTCAAAATGACCTAGAAAATGCTATCAGGAGGAAGAATCCTTCCATTATTGGAACAACCAATATTGCTGATATACCTCCAGAGTTGGTCAATCCTGATGCAGTTGAATTAGTTTCAGACATCAGAAGGGAATATGCTAGAAAGCTTGAGGAGTCACAGGAACGGGCTAGGAAACTTCGTGAAGACCTGGCTGTTGAGGAACATCGTGGGCAAGAACTCAGTAGAATTCTTAAAGAAATACTTCCAGATCCTAAGGTGCCAAACATTCATAAATCACGACCAAGGAGAAGAAATAGCATCGAGCGTCGAAAGATTTCAAAGCATCTCACTGAAGAAGCCATGAATTATTTTGATGAGTGTGTATCAATATCAACATTTGATAGTTCTGATTTCTCGTCACCAGAAGACCCACCGCCTGTTGTCACTTCTTCAGTTAGTGATGGTAGATTTTTTGCATGTGGAAGTCCAAGTGCCTCAACCACCTATTGTTCCGATGTTCATCTCAATCACAAGAAGGAATCAGCAAATCAAGTTGAATGTACCCCCAGTCATGAGGTATCTGTTTTAACAGCTGGCAGCAGTTCTGAGGAGCCAAAAAATGATCAAGGGAGTTTAGCAGGTATCAGAGAACAAATGGGAACTTTCCGGTTCTCATTTGCTCATGAACCAACAGAAACTCTTGGTCTTCACCATGACATAAGAAATTATGTTAAGAGGTTTGAGAAAGAAATCCACAAAGATACTGGGGAATGTCAAATTGCAAGATCAAGCAGCTATGATGCAGATGACTATAAGTTGCAGGTTTCAGCTGAGAGCTTGTTGTTTGATAAAGTGATTTTTAAGAACAGAATAGAGTCTGGAAGTCTGCTTCTCTGCTTTGGTGGTATAGCAATTTAA 2493 44.2 MRYSVKAGASIGSYNKDMLKIGRSIKWALLVGLVSTCGKLSSVFIVATIEISRFIHSPPHRACAKRVHEAMKGFNIPEFLRASFFTKVSALVLISFALFYLGRHYSDGYQQLIFFSSRQQNPVIAQTPSVALSPNANKTFGLASITPNQTLETTNPPLPPPLLLTLTLPPPPPPAVVDKTGILDEIGTMSEEFEVGEFDSKLIKSLGNLSRQDGRGDDGNGGGSGGECRIVAADGSVVVERDDAINRLMAVSAFKSMSKRGSLGTPSTNLASAAESNSENLGKKVLHRRSRSVSAFSRNSLETPSSSQLPSTDKEEFLNKRDNPLFWSSTSPPRGSTETENVIGIAKFDSSASRLGRPASNVSDTRRGRSVSRNSGYVNTSSGNRKEVGRSLSRVDTGRRRRSVSRGRYGNSESEVEQDYNLSSSIKTRNNGNLGRSIEKKDNLITNASELSDQTKNMQTWSSQHPLLEPSDGLIIPNWEDGISTRSYSEAEEKTIKAVFEQMKSLQSPASDAGTSGIYETVRSEVRRAISEVQNDLENAIRRKNPSIIGTTNIADIPPELVNPDAVELVSDIRREYARKLEESQERARKLREDLAVEEHRGQELSRILKEILPDPKVPNIHKSRPRRRNSIERRKISKHLTEEAMNYFDECVSISTFDSSDFSSPEDPPPVVTSSVSDGRFFACGSPSASTTYCSDVHLNHKKESANQVECTPSHEVSVLTAGSSSEEPKNDQGSLAGIREQMGTFRFSFAHEPTETLGLHHDIRNYVKRFEKEIHKDTGECQIARSSSYDADDYKLQVSAESLLFDKVIFKNRIESGSLLLCFGGIAI 830
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu7g01090 830 PANTHER OS11G0129800 PROTEIN 249 827 - -
Nenu7g01090 830 CDD UDM1-RNF168-RNF169-like 572 611 - -
Nenu7g01090 830 MobiDBLite consensus disorder prediction 389 408 - -
Nenu7g01090 830 MobiDBLite consensus disorder prediction 208 227 - -
Nenu7g01090 830 MobiDBLite consensus disorder prediction 354 388 - -
Nenu7g01090 830 MobiDBLite consensus disorder prediction 409 433 - -
Nenu7g01090 830 MobiDBLite consensus disorder prediction 711 733 - -
Nenu7g01090 830 MobiDBLite consensus disorder prediction 711 735 - -
Nenu7g01090 830 MobiDBLite consensus disorder prediction 292 313 - -
Nenu7g01090 830 MobiDBLite consensus disorder prediction 258 279 - -
Nenu7g01090 830 MobiDBLite consensus disorder prediction 353 437 - -
Nenu7g01090 830 MobiDBLite consensus disorder prediction 257 339 - -
Nenu7g01090 830 MobiDBLite consensus disorder prediction 323 339 - -
Nenu7g01090 830 Coils Coil 523 543 - -
Nenu7g01090 830 Coils Coil 574 601 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu7g01090 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4046911 Nenu Nenu3g00247 Nenu-Chr3:5198684 Nenu7g01090 Nenu-Chr7:24147097
4050183 Nenu Nenu4g01071 Nenu-Chr4:37557031 Nenu7g01090 Nenu-Chr7:24147097
4064814 Nenu Nenu7g01090 Nenu-Chr7:24147097 Nenu5g01140 Nenu-Chr5:43116538