Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nin5g01527 | ATGTACGATGATATCGCTAATAATACGATGAATCCACATCCCGGTACCATAATCAACAACCCTCATGGCGGTGATGTCTATGCTGGTGTGCCCAAGGATTATATCGGAGATGCCGTAACTGCAGCAAACCTTTATGCCGTGCTTCTTGGTGATGCTACGGCAGTAAAAGGTGGAAGCGGAAAGGTTGTGGCCAGCCAGCCGAACGATAGGATCTTTGTGTATTACACAGATCATGGAGGCCCTGGAATCCTAGGAACACCGAACGGGCCTTTCATTTTTGCAAACGATTTGATTGCGTCTTTGGAGAAGAAGCATGCTAGTGGTACCTACAAAGAGATGGTTATATATGTCGAAGCGTGCGAAAGTGGTAGTATCTTCGATGGTTTGTTGTCTCAAGACTTAAACATTTTCGTCACAACAGCGTCGAATCCAAATGAGAGCAGTTGGGCAACTTATTGTCCAGGAATGAATCCTCCCCCGCCTCCCGAGTATGCAACGTGTTTAGGAGACTTGTATAGCATTTCTTGGATGGAAGACAGTGATTCGGAAAACGTAAGGAATGAAACATTGCAACAACAATATGAGAAGGTTAAACTGAGGACTTACAATAACCATTCGTACTTCGGTTCTCATGTCATGGAGTACGGCACTCAGAGCATGAGTGACGAAACCGTTTCAGTTTATCAAGGTTGTGGGCCCACTTTCAACTTTTCATCCGCAAATACATTCCAATATAATGAAGCCATGGAGGGTGTCGACCAAAGAGATGCCGATATATTTTCCATGTGGGAAAGGTACAAAAAGTTAACAGATGGGCAACAAAAGAAAGAGGCTCTAAAGGAAATAACAGAGATAATGGCACATAGGGTGCACCTTGATAGCAGCGTGGAGTCGATAGGTGTTTACTTGTTTGGCCATGAACATGCCGATTTAGCTCTCCATTCCCTGCGGAGTCCAGGGTTAGCCGTTGTGGATGATTGGGCATGCCTTAAATCTACGGTAGTTCGGACGTTTGAGACACATTGTGGCGTGTTGACACAATATGGAATGAAACATATGCGAGCATTCGCCAATATTTGCAACAATGGCATCAATAATGCGGCAATGGAGGAGGCTTCTGCAACTACATGTAGCGGGTATGACATGGGACAGTGGAACCCTTCAACGTCCGAAGGGATCCAGTGCCCAACTACCGACTCCTCCCGGAATTGCGTTATCGGAGCCAAGCCAGGAATGGCCGTTAGTGGACACGGAAAAAAGGGGAAGGAGAAGGATCTTCTTCGGTGGATCCCTCTTGCTCCTGTTTAG | 1308 | 46.18 | MYDDIANNTMNPHPGTIINNPHGGDVYAGVPKDYIGDAVTAANLYAVLLGDATAVKGGSGKVVASQPNDRIFVYYTDHGGPGILGTPNGPFIFANDLIASLEKKHASGTYKEMVIYVEACESGSIFDGLLSQDLNIFVTTASNPNESSWATYCPGMNPPPPPEYATCLGDLYSISWMEDSDSENVRNETLQQQYEKVKLRTYNNHSYFGSHVMEYGTQSMSDETVSVYQGCGPTFNFSSANTFQYNEAMEGVDQRDADIFSMWERYKKLTDGQQKKEALKEITEIMAHRVHLDSSVESIGVYLFGHEHADLALHSLRSPGLAVVDDWACLKSTVVRTFETHCGVLTQYGMKHMRAFANICNNGINNAAMEEASATTCSGYDMGQWNPSTSEGIQCPTTDSSRNCVIGAKPGMAVSGHGKKGKEKDLLRWIPLAPV | 435 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nin5g01527 | 435 | CDD | legumain-C | 256 | 377 | IPR048501 | - | |
| Nin5g01527 | 435 | PRINTS | Hemoglobinase (C13) cysteine protease signature | 33 | 48 | IPR001096 | GO:0006508(InterPro)|GO:0008233(InterPro) | |
| Nin5g01527 | 435 | PRINTS | Hemoglobinase (C13) cysteine protease signature | 61 | 80 | IPR001096 | GO:0006508(InterPro)|GO:0008233(InterPro) | |
| Nin5g01527 | 435 | PRINTS | Hemoglobinase (C13) cysteine protease signature | 110 | 126 | IPR001096 | GO:0006508(InterPro)|GO:0008233(InterPro) | |
| Nin5g01527 | 435 | Pfam | Peptidase C13 family | 1 | 230 | IPR001096 | GO:0006508(InterPro)|GO:0008233(InterPro) | |
| Nin5g01527 | 435 | FunFam | Vacuolar-processing enzyme beta-isozyme | 254 | 382 | - | - | |
| Nin5g01527 | 435 | Gene3D | - | 254 | 384 | IPR046427 | - | |
| Nin5g01527 | 435 | Pfam | Legumain, prodomain | 280 | 377 | IPR048501 | - | |
| Nin5g01527 | 435 | Gene3D | - | 1 | 253 | - | - | |
| Nin5g01527 | 435 | PANTHER | HEMOGLOBINASE FAMILY MEMBER | 1 | 377 | IPR001096 | GO:0004197(PANTHER)|GO:0006508(InterPro)|GO:0006624(PANTHER)|GO:0008233(InterPro)|GO:0051603(PANTHER) | |
| Nin5g01527 | 435 | PIRSF | AE | 1 | 394 | IPR043577 | GO:0004197(InterPro)|GO:0051603(InterPro) | |
| Nin5g01527 | 435 | PIRSF | Legumain | 1 | 394 | IPR001096 | GO:0006508(InterPro)|GO:0008233(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nin5g01527 | K01369 | legumain [EC:3.4.22.34] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nin | Nin-Chr5:23732749 | Nin5g01530 | Nin-Chr5:23766559 | dispersed | |
| Nin | Nin-Chr5:23732749 | Nin5g01528 | Nin-Chr5:23743183 | tandem |