Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nin5g01540 | ATGGCGGCCAACTCCTACTTCACCCTCGCGGTGAGTAACTTGAATCCGATGATAATGAACTATCTCTTGGGGAAGGAGGATGGTGGCGGTCATGATTCCTTGGGGCCGCTAATCTTGATGGCAAGGCCTAGAGGGTGGACGCTCATTTCCACGAGTGGGAACAGTCAGTTGTCTGATGATGAAGGCTGCCTGCTCGGCTACCACTGTCAACAGGTCCTGGCGCCTCGCCCCTGCCTCTCTGAATTGGCGTTCCTCGAACCATTGCATTGGGTTGTTCTTTATAATGAGAATAGATTTGCTGCTTTCTTGGGGCTGGGGTGGATGGGATTTGGACGCCTCGAGCCTTGCGCTCTTGTCGTAGTACGCCCACCCCTGGACGTGGTGGGGACAGTTAAGCCTAGACCTGTGGTTGCTGGTGGAGGTGCAGTTGAGGCTGTCATATGTATTTATTTGGATTTTTTTGCTACAAGTTTAGGATCTTGGGAGCAATTGGCAATTGTTGAATTTGCTGAATCCTTGTTAATCATTCCAAAGGTTCTTGCAGTCAATGCAGCAAAGGATGCAAATGATTTTGTTGCTAAATTGCCGTCATACCACAATACTACACAAACAAAGGCTGATAAGAAGCAGTTATTAAGGTAG | 642 | 48.6 | MAANSYFTLAVSNLNPMIMNYLLGKEDGGGHDSLGPLILMARPRGWTLISTSGNSQLSDDEGCLLGYHCQQVLAPRPCLSELAFLEPLHWVVLYNENRFAAFLGLGWMGFGRLEPCALVVVRPPLDVVGTVKPRPVVAGGGAVEAVICIYLDFFATSLGSWEQLAIVEFAESLLIIPKVLAVNAAKDANDFVAKLPSYHNTTQTKADKKQLLR | 213 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nin5g01540 | 213 | SUPERFAMILY | GroEL equatorial domain-like | 134 | 203 | IPR027413 | - | |
| Nin5g01540 | 213 | PANTHER | CHAPERONIN | 130 | 204 | IPR017998 | GO:0005832(PANTHER)|GO:0006457(PANTHER)|GO:0051082(PANTHER)|GO:0140662(InterPro) | |
| Nin5g01540 | 213 | Pfam | TCP-1-cpn60 chaperonin family | 131 | 205 | IPR002423 | GO:0005524(InterPro) | |
| Nin5g01540 | 213 | Gene3D | - | 120 | 210 | IPR027413 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nin5g01540 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nin | Nin-Chr1:41461847 | Nin5g01540 | Nin-Chr5:24089441 | dispersed | |
| Nin | Nin-Chr5:24082799 | Nin5g01540 | Nin-Chr5:24089441 | tandem |