Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Nin5g01571	ATGGATTTCTCATCCCTCTCAGAATCGCAGAAACAACAACTCCAACAACTCCAACAACAATTTAAAGAACACCAGCAAAAACAACAAGAAGAAGCTGCGGCAGCGGCGGCGGCGGCGGCGGCAGCCGCACAACAACAACCACAACCACCCTACGATCCATCGTCGTCGACCCAGGTTCAAGTTCAACCGTATGACCCCTCGTCCCAGGTTGTCACGCAATCGTACGATCAACAACAATCGTATTACCCCTATTACCAATACCAACAAGACTACGCCGCCGCAACAAGCTATTACCAGGCCTCCGGCGATTATTCCAATGCGTACCAGCAATACCCACAGCCGGAGAATAATTTGGGAATTGATCCCACGGTGGGACATATCCAAAATACCTATAATCCGAATCAAATTGTTGGTAGCGATCAGGCCAATCAAGCCGCCAGCGGGCTCAATGCTGTCGCTGCCGCCGCCGTGGCAGCTCTCTCGCAGTTGACGCAGTTTGCGGGGAATATGGATGCAGCCGAGAGGGCACAGTGGTATGGGGCTGGAACGATGCAATCTGGGGCGTTTATGCATCCTCCGGTTGGTCAGGCTCCATATGGAGATGGTGGTAGAAGGGGTGCAGGTCCACCAAGAGGTGGTTTTCGTGGAAACACTGGCAACCGAGGCCCGCCTTTCCGATGGAGGGGTCGTGGTCGAGGTAGGGGAGGCCAGCACTATCCACCACATGGTATGCCCTCGTCTTCTCGTTCAGAATTTTCTGCTGCTGAAACAAAACCTGCTGAAGAAGTGGCAAAAGGATCTGCAGTTGATAATGGTGGTAAGGATCCTGGTGCTGTGCCTATCCGAATTGCTTGGTGTGAATTGTGTAGGGTTGATTGCACCAGTTTGGAAATTCTTGAGCAGCACAAGAATGGAAAACGTCATAAAAAGAATTTGCAGAAATTGGAAGGGATGAAAACGGCTTGTTTTCCTGCTGCTGCTGAATCCCAGGAGAAAATTGTCATTGATCCCAGTGAGCAAGTGCCTGAACTTCCGCAGGGAAATGACGGTAATAATGGGACGATGATACCTGAGAATAAAGAGACAGATACTGCTACTGATGATAGTAATAAAGTAGAAAGAGGACCGAAGAATGAGCAAGCAGACAGCAAGCCGTGGATGAAAAGGAAAATGAGAGGTGGTCGAGGAGGTGGGCGTGGAAGTAAACGAATGAAAGCTTCTGGCGGATCAGCACGACAACCTCCGAAACCCAAAATAGTGATTCCTTTAATATGCGACTTGTGCAATGTCAAGTGCGACACGCAGGAAGTGTTTGACCGCCATGTTGCTGGTAAGAAGCACATTGCTAAGCTTAAAAGATTTGAAGGTCACCAAGCAATGTACGGACCAACAGGGGTCCAAGCTCTTTATCCTCCCAATCCCATTGCACAGACCTTATATCGTCCTCAACAAACCGGGTATGGTGCACAGGGCACATATCCTCCTCCTCCTGAGACATATATAACTCCTCTAACCCAAAATCCCAACCCTGAGCTTTCAGATGCACCTCTTGAATTTGGTAGCCGGAGTGCTCCGCCTGAAGCTGCACAGCAATCAGGCACTAAACAAGATGCACAGGAAGAATTAGATTAG	1632	49.57	MDFSSLSESQKQQLQQLQQQFKEHQQKQQEEAAAAAAAAAAAAQQQPQPPYDPSSSTQVQVQPYDPSSQVVTQSYDQQQSYYPYYQYQQDYAAATSYYQASGDYSNAYQQYPQPENNLGIDPTVGHIQNTYNPNQIVGSDQANQAASGLNAVAAAAVAALSQLTQFAGNMDAAERAQWYGAGTMQSGAFMHPPVGQAPYGDGGRRGAGPPRGGFRGNTGNRGPPFRWRGRGRGRGGQHYPPHGMPSSSRSEFSAAETKPAEEVAKGSAVDNGGKDPGAVPIRIAWCELCRVDCTSLEILEQHKNGKRHKKNLQKLEGMKTACFPAAAESQEKIVIDPSEQVPELPQGNDGNNGTMIPENKETDTATDDSNKVERGPKNEQADSKPWMKRKMRGGRGGGRGSKRMKASGGSARQPPKPKIVIPLICDLCNVKCDTQEVFDRHVAGKKHIAKLKRFEGHQAMYGPTGVQALYPPNPIAQTLYRPQQTGYGAQGTYPPPPETYITPLTQNPNPELSDAPLEFGSRSAPPEAAQQSGTKQDAQEELD	543

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Nin5g01571	543	MobiDBLite	consensus disorder prediction	195	277	-	-
	Nin5g01571	543	Pfam	Zinc-finger double-stranded RNA-binding	423	447	IPR022755	-
	Nin5g01571	543	MobiDBLite	consensus disorder prediction	47	69	-	-
	Nin5g01571	543	MobiDBLite	consensus disorder prediction	344	360	-	-
	Nin5g01571	543	SUPERFAMILY	beta-beta-alpha zinc fingers	413	454	IPR036236	-
	Nin5g01571	543	Coils	Coil	7	34	-	-
	Nin5g01571	543	MobiDBLite	consensus disorder prediction	1	69	-	-
	Nin5g01571	543	SMART	ZnF-U1-5	281	315	IPR003604	GO:0003676(InterPro)\|GO:0008270(InterPro)
	Nin5g01571	543	SMART	ZnF-U1-5	420	454	IPR003604	GO:0003676(InterPro)\|GO:0008270(InterPro)
	Nin5g01571	543	MobiDBLite	consensus disorder prediction	338	415	-	-
	Nin5g01571	543	Gene3D	Classic Zinc Finger	259	315	-	-
	Nin5g01571	543	Gene3D	Classic Zinc Finger	401	453	-	-
	Nin5g01571	543	MobiDBLite	consensus disorder prediction	361	389	-	-
	Nin5g01571	543	PANTHER	OS06G0651300 PROTEIN-RELATED	11	526	-	-
	Nin5g01571	543	MobiDBLite	consensus disorder prediction	1	23	-	-
	Nin5g01571	543	SUPERFAMILY	beta-beta-alpha zinc fingers	273	318	IPR036236	-
	Nin5g01571	543	Pfam	Zinc-finger of C2H2 type	285	308	IPR013087	-
	Nin5g01571	543	MobiDBLite	consensus disorder prediction	485	543	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Nin5g01571	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Nin	Nin-Chr5:25714820	Nin6g00934	Nin-Chr6:10960197	dispersed
	Nin	Nin-Chr5:25714820	Nin5g01571	Nin-Chr5:25714820	tandem