Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Nin5g01594	ATGCACGATGCTTCTCCTTCCGGACAACCATCGCACAGCGGGGCAAATGTAGGGGGGGGCTACCCCATGTCGGAAATTATTTTTCTCTGTTTGTTCCTTTGTAAAGGTGGGATGGCAAAGAGTTTGTTCAAGCAAGAACATGATCTTGGGAAGAGGCGTGCGGAGGCTGCTAGAATTAGAGACAAATACCCTGATAGAATTCCTGTAATTGTGGAGAAGGCAGAGAGGAGTGATGTCCCCAACATCGATAAGAAAAAGTACCTTGTTCCAGCTGACTTGACAGTAGGCCAATTTGTTTATGTGATTCGCAAAAGGATTAAACTGAGTGCAGAGAAGGCGATTTTTATATTCGTGGACAATGCCCTTCCACCGACAGGGGCGATTATGTCTGCGATATACGAAGAGAAGAAAGATGAGGATGGTTTCCTTTATGTGACTTATAGCGGAGAGAACACATTTGGGGATGATGAGCTCCAGTAG	480	45.62	MHDASPSGQPSHSGANVGGGYPMSEIIFLCLFLCKGGMAKSLFKQEHDLGKRRAEAARIRDKYPDRIPVIVEKAERSDVPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNALPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGDDELQ	159

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Nin5g01594	159	SUPERFAMILY	Ubiquitin-like	41	154	IPR029071	-
	Nin5g01594	159	Pfam	Autophagy protein Atg8 ubiquitin like	51	154	IPR004241	-
	Nin5g01594	159	CDD	Ubl-ATG8	49	151	-	-
	Nin5g01594	159	Gene3D	-	34	154	-	-
	Nin5g01594	159	PANTHER	MICROTUBULE-ASSOCIATED PROTEINS 1A-1B LIGHT CHAIN 3-RELATED	41	154	IPR004241	GO:0006995(PANTHER)
	Nin5g01594	159	FunFam	Autophagy-related protein	38	154	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Nin5g01594	K08341	GABA(A) receptor-associated protein

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Nin	Nin-Chr5:27221601	Nin6g00908	Nin-Chr6:10440628	dispersed
	Nin	Nin-Chr5:27221601	Nin8g01199	Nin-Chr8:19809235	transposed