Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nin5g01640 | ATGGAATCCAAACCACCACCACCGCCACCGCCGCCGCCGTCGCTCCTCCGCCGTCTAATCAATTTCGACGCCGCCGTATCACTCCACCTCCACAATCTAACACAACCAATCCTCCCCCGTCCCTTCCTCAAATCCCTAGAAATCTCCGGCGACGGCCGCCTTTTCTTCCCCGTTCTCCTCTCCCTCCTCCTCTCCCCTCTCTCCAAAACCTCTCCTCTGCTCCTCGCTCTCCTCCTAAACCTCCTCATCGGATCTCTCCTCGATCTCCTCCTCGTCGGACTCATCAAACACCTCGTACGCCGTCCTCGTCCGGTCTACAACAAGCACATGTTCCTCACTTTCGCCGTCGACCACTGGTCCTTCCCAAGCGGCCACTCCTCCAGGGTTTGCTTTATCGCGACGTTGTTCTGCCTCTCCTCCGAGGATTTGATCCCCAACATTTTGATTCAATTGAGGGATTTGAAGCTTGATTTTATTAGGAATTCGGTCGGTTTGGATTTTGTGGTCGTGTTTGTTGTGGTTTGGGCGATGGTGACTTCGGTTTCTAGGGTTTTGCTCGGCCGGCATTTCGTGTTTGATGTTATCGCCGGAGCTTCGTTGGGTGTTGGTGAAGGAAGCTGGACCACTTTTGACTGA | 636 | 54.25 | MESKPPPPPPPPPSLLRRLINFDAAVSLHLHNLTQPILPRPFLKSLEISGDGRLFFPVLLSLLLSPLSKTSPLLLALLLNLLIGSLLDLLLVGLIKHLVRRPRPVYNKHMFLTFAVDHWSFPSGHSSRVCFIATLFCLSSEDLIPNILIQLRDLKLDFIRNSVGLDFVVVFVVVWAMVTSVSRVLLGRHFVFDVIAGASLGVGEGSWTTFD | 211 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nin5g01640 | 211 | Gene3D | Phosphatidic acid phosphatase type 2-haloperoxidase | 106 | 210 | - | - | |
| Nin5g01640 | 211 | PANTHER | SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE | 3 | 204 | - | GO:0042392(PANTHER) | |
| Nin5g01640 | 211 | SUPERFAMILY | Acid phosphatase-Vanadium-dependent haloperoxidase | 10 | 207 | IPR036938 | - | |
| Nin5g01640 | 211 | SMART | acid-phosph-2 | 76 | 209 | IPR000326 | - | |
| Nin5g01640 | 211 | Pfam | PAP2 superfamily | 78 | 202 | IPR000326 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nin5g01640 | K22904 | presqualene diphosphate phosphatase [EC:3.1.3.-] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nin | Nin-Chr5:31063802 | Nin9g01553 | Nin-Chr9:26419774 | dispersed | |
| Nin | Nin-Chr2:39649356 | Nin5g01640 | Nin-Chr5:31063802 | wgd |