Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Nin5g01710	ATGACGAGGCGTTGTTCTCATTGTAGTACCAATGGGCACAATTCTCGGACGTGCCCGAACAGGGGTGTGAAGCTTTTTGGTGTGAGGATTACGGATGGGTCGATTCGGAAGTGTGCGAGTATGGGTAACTTGACCCACTATACTGGATCCACCAGCGGCGGCGGTGCCGGAGGATATAACCATCTGAACGGCGGCGGTGCGGCGGAGAATCTTGATTCTCCGGGAGCCGGCGGCGATAATAACGATCATGGTGTTGATGTCGCCGACGGTTACGCGTCGGAGGATTTCGTCCCTGGGTCCTCGTCTTCACGCGAGCGCAAGAAGGGTGTTCCATGGACAGAAGAGGAACATAAGATGTTTCTGGTTGGATTGCAAAAGCTTGGTAAAGGTGATTGGCGTGGCATAGCTCGGAAATATGTAATTTCAAGGACCCCCACACAAGTTGCTAGTCATGCCCAAAAATACTTTATTAGGCAAAGCAATAGTTCAAGGAGAAAGAGACGGTCGAGCCTCTTTGATATGGTAGCCGATGATTCAGCCGAAACTCCTATGCCTTCGCATGAGGTCCATGTTGTCAACCCTTCACAAGCCGAGACAAGCAACCACAACAACAACAACAGCAACAACAACAACAACGACAACAACAACAACGACAACATTAAAGACAACAACACCCTGTTGGCTATTAATACTTTCGAGGAAGAATCTGAATCAATGGAGTCTACTGTTCCTGAGGATCCTCCACAACCAATACCTACTCCGAATCCAGTTGCCTCAGTTGCTCCCCAGTTCTGTTACCCGGTTGTCTTCCCTACTTACATGCCTCCATTCATACCGGTTGCTGTCCCATATTGGCCGGGCTGCAATATGAAGCCATTTCAAGTGGAAACACATCAAGTGCTTAAGCCAACCGCGGTTCATTCAAAGAACCCAATTCCTGTTGATGGGCTCATGAGCATGTCGAAGCTGAGCTTAGCGGAACCTGTGCAAAATGGCGAGCCCATCCCTCGAACATTAAACCTTGTTGGAGGACTGGGTAGACAGTCAGCATTCCATGCCAAGTCCTCAGCGGGCAGTCCAAGCCACAGCCCCATTCATGCAGTCTAG	1107	49.95	MTRRCSHCSTNGHNSRTCPNRGVKLFGVRITDGSIRKCASMGNLTHYTGSTSGGGAGGYNHLNGGGAAENLDSPGAGGDNNDHGVDVADGYASEDFVPGSSSSRERKKGVPWTEEEHKMFLVGLQKLGKGDWRGIARKYVISRTPTQVASHAQKYFIRQSNSSRRKRRSSLFDMVADDSAETPMPSHEVHVVNPSQAETSNHNNNNSNNNNNDNNNNDNIKDNNTLLAINTFEEESESMESTVPEDPPQPIPTPNPVASVAPQFCYPVVFPTYMPPFIPVAVPYWPGCNMKPFQVETHQVLKPTAVHSKNPIPVDGLMSMSKLSLAEPVQNGEPIPRTLNLVGGLGRQSAFHAKSSAGSPSHSPIHAV	368

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Nin5g01710	368	ProSiteProfiles	Myb-like domain profile.	104	156	IPR001005	-
	Nin5g01710	368	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	104	160	IPR017930	-
	Nin5g01710	368	PANTHER	TRANSCRIPTION FACTOR KUA1	1	233	IPR052245	GO:0009723(PANTHER)\|GO:0009739(PANTHER)
	Nin5g01710	368	MobiDBLite	consensus disorder prediction	196	222	-	-
	Nin5g01710	368	SMART	sant	108	158	IPR001005	-
	Nin5g01710	368	FunFam	transcription factor MYB1R1	110	161	-	-
	Nin5g01710	368	CDD	SANT	111	156	IPR001005	-
	Nin5g01710	368	NCBIfam	myb-like DNA-binding domain, SHAQKYF class	107	159	IPR006447	GO:0003677(InterPro)
	Nin5g01710	368	Gene3D	-	110	161	-	-
	Nin5g01710	368	Pfam	Myb-like DNA-binding domain	110	156	IPR001005	-
	Nin5g01710	368	SUPERFAMILY	Homeodomain-like	106	161	IPR009057	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Nin5g01710	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Nin	Nin-Chr2:8276925	Nin5g01710	Nin-Chr5:34357115	dispersed
	Nin	Nin-Chr2:50912687	Nin5g01710	Nin-Chr5:34357115	dispersed
	Nin	Nin-Chr5:8904742	Nin5g01710	Nin-Chr5:34357115	dispersed
	Nin	Nin-Chr5:34357115	Nin9g02237	Nin-Chr9:34130939	dispersed
	Nin	Nin-Chr5:34357115	Nin1g00612	Nin-Chr1:6535898	transposed

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Nin	Myb_DNA-binding	1.3e-11	CL0123		TF	MYB-related