Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nin5g01729 | ATGGCAGACACAGATTTCCACACCATTTCCAAGCCACAAAACCCACCTCCACAACTCCCTCTAAACCCCACCAAATTCTACACCCAATTCATCTACAAAGCCATCATGGTATCAGCCTTCCTGCTCCTACTCCCATTTCTACCTTCCCAAGCACCTGATTTCTTCAATGACACCCTCACCACCAGGATCTGGGAGCTCCTACAGCTCCTCTTCGTCGGAATCGCCGTCTCGTACGGGCTCTTCAGCAAGCGGAACGACGAGACCGAGAAAGAATCACACGGCTCGAAATTCGAGAACGCTCAGTCCTACGTCGCCGGGTTGCTCCAGGTCTCGTCGGTGTTCGATGACGATTCCGACAACTCCCCTGTTTCCGATGATAACAGCAAGGTTCAGACCTGGAACTCTCAGTATTACAGAGGTGAACCCATGGTAGTTGTAGCTCGAGAAAGCTCTGTTCTCGAAGAACAACATAGTAGTAGTAGTACTGTTATGTCCGGTTCCCAGACAATCGGAAACCCTCTTCTGCTCCCGCCTGTTCGGAGCTCGAGAAATGGAGTTTCCGAACAAGATGCAAGTCCCATTAGTAGGACGAATTCGAGATCGAATTCGATGCGGTTTTCCGGTGTGACGAGGAACGGGGATTTGTGGGGTGCGAGCTCGGAGGGTTTGGAGGGGAAGGTAGAGGAAGATGTCGTGTTTCGATCTCCGATTCCGTGGAGATCGAGGTCGGCGAGGATGGAGGTGAAGGAAGAAGATTTGGATGGTGCTCCGTTGTACCAACCATGGAAACCGTCGAGGAAAAACATGTCGGCTTGTTCCGCGTCCTTAACCTCGGAGTTGCAGGCCAAGAGTGTCGAGGATGTTGTGAAGAAAAAGCCTTCATACAAGTCTTCTTCGTTTCAGTCGATTCCGCCTCCTCCGCCGCCGCCTCCGCCGCCTCACAGAACATCGTCGGCGAACTACACTCGTACGAGGAGCAACAACCCGTTTGTCGGAAAGGAACTGAGGAGAAGCGTTACGAGTTTCGAAACAGAGGATTTCCCGAGCAGGGGAGAGCTCGATTTGGGGTTTAGAACCCGGAGTGCGAGTGCATTGATGGGGAAATCAGTCAGGACAGTGATGGGAAAGGGTTCGAATGTGGACGAGGTTGATAAGGATCAAATGAGGAACATGGACGAGGAAAATACTAGGCGAAATTACGAAGAATGTGACAAGAAAGTGGTTACGGAAACCGAGGATGAGTCCGAGGAGAGCGATGAGGATGAGGATGATAGAATGGAAGAGCTCCCCGAGAAGGATGAGAAGGTGGTTAAGGATGTTTGTAGTAGTGATACGGGTCCGGATGTCGATAAGAAAGCCGATGAGTTTATTGCGAAGTTTAGAGAGCAGATTAGGCTTCAGAGAATAGCGTCCATCAGAAGATCAACCGGGCAGGCACCGAAAACATTAATGAGGTAA | 1458 | 50.82 | MADTDFHTISKPQNPPPQLPLNPTKFYTQFIYKAIMVSAFLLLLPFLPSQAPDFFNDTLTTRIWELLQLLFVGIAVSYGLFSKRNDETEKESHGSKFENAQSYVAGLLQVSSVFDDDSDNSPVSDDNSKVQTWNSQYYRGEPMVVVARESSVLEEQHSSSSTVMSGSQTIGNPLLLPPVRSSRNGVSEQDASPISRTNSRSNSMRFSGVTRNGDLWGASSEGLEGKVEEDVVFRSPIPWRSRSARMEVKEEDLDGAPLYQPWKPSRKNMSACSASLTSELQAKSVEDVVKKKPSYKSSSFQSIPPPPPPPPPPHRTSSANYTRTRSNNPFVGKELRRSVTSFETEDFPSRGELDLGFRTRSASALMGKSVRTVMGKGSNVDEVDKDQMRNMDEENTRRNYEECDKKVVTETEDESEESDEDEDDRMEELPEKDEKVVKDVCSSDTGPDVDKKADEFIAKFREQIRLQRIASIRRSTGQAPKTLMR | 485 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nin5g01729 | 485 | MobiDBLite | consensus disorder prediction | 429 | 450 | - | - | |
| Nin5g01729 | 485 | MobiDBLite | consensus disorder prediction | 413 | 428 | - | - | |
| Nin5g01729 | 485 | MobiDBLite | consensus disorder prediction | 378 | 412 | - | - | |
| Nin5g01729 | 485 | PANTHER | EXPRESSED PROTEIN | 4 | 478 | - | - | |
| Nin5g01729 | 485 | MobiDBLite | consensus disorder prediction | 290 | 334 | - | - | |
| Nin5g01729 | 485 | MobiDBLite | consensus disorder prediction | 377 | 450 | - | - | |
| Nin5g01729 | 485 | Pfam | Cotton fibre expressed protein | 447 | 476 | IPR008480 | - | |
| Nin5g01729 | 485 | MobiDBLite | consensus disorder prediction | 317 | 334 | - | - | |
| Nin5g01729 | 485 | MobiDBLite | consensus disorder prediction | 182 | 206 | - | - | |
| Nin5g01729 | 485 | MobiDBLite | consensus disorder prediction | 300 | 316 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nin5g01729 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nin | Nin-Chr3:33099532 | Nin5g01729 | Nin-Chr5:34723384 | dispersed | |
| Nin | Nin-Chr5:34723384 | Nin9g00477 | Nin-Chr9:5215749 | dispersed |