Gene detail

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Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Nin6g00840	ATGGCGACGGCGGCGGTGGCGGTGGCGGAGGAAGTGGACGACGAGCACGACTCCAAAGAGGCGGTGCTGCAAAGATATTTCTTGCAAGAATGGAAGCTCGTGAAATCTATCCTCGACGATATCGTCTCCCATGGCCGAGTCTCCGATCTCTCATCCGTCTCCAAGATCCGATCCATCATGGATAAATATCAGGAACAAGGACAACTCTTAGAGCCTTACCTGGAGAGTATCATTTGTCCACTGATGTCCATTGTTCTTTCTAAAACAATTGAATTAGGTGTAGAGTCTAATGAACTTCTTGAAGTAATCAGTCCTTTATGTATTATAATTTATTCTCTGGTCACTGTTTGCGGATACAAGGCTGTCATCAGATTTTTCCCTCATCAAGTTTCTGATTTAGAACTTGCGGTGTCACTTTTGGAAAAATGTCACTGCACAAGTGCTGGAACAGCACTACGGCAAGAAAGCACAGGGGAGATGGAGACAAAGTGTGTGATATTGTTGTGGCTGTGCATACTTGTGTTAATCCCTTTTGATATGTCGTCTGTGGATACCAGCATCGCAAATAGTGAACGTGTGGTAACAAATGAGCCACCCCCTTTGGTAAATAGGATATTAGAGATCTGTAAGGATTATCTTTCAAATGCTGGTCCTATGCGCACCATAGCTGGATTGCTGCTTTCAAGACTTCTTACACGCCCAGATATGTTGCATGCATTTATCAGCTTTACCGAATGGGCTAATGGAGTTCTATCTTCTTCAACAGAAGATGTAATGCATCAGTTTAAGTTACTTGGTGTTGTAGAAGCGTTGGCTGCTATTTTTAAGACTGGAAGCAAGAAAGTGCTACTTGATATTGTTCCGGTTGTATGGAATGACGCATCTGTCTTGATCAAATCTACTACAGCAGCTCGTAGTCCTTTGCTTCGCAAGTATTTGGTAAAGCTAACTCAGCGAATGGGGCTAAATGTACTTCCTCATCGTCCAATAACCTGGCGTTACGTGGGCAAACATAGTGCACTTGGAGAGAATATATCAGCAAACACATCCAGAACAGCTGATCAAGGAAGTCAAGTGGCAAATTCGGGCTTGTCCTTTTCAGACCAAAATGCTTCTGAGCAAGAGGAAGATATGGACGTGCCTGAAATTATAGAAGATATTATTGAACTATTGTTGTCTGGACTGAAAGATACGGATACTGTCGTTCGATGGTCTGCTGCAAAAGGTATCGGGCGTATAACTTCACGTCTTACATACACCCTCTCTGAAGAAGTCCTTTTGTCTGTACTTGAGCTTTTTTCACCTGGTGAGGGGGATGGATCATGGCATGGAGGATGCTTGGCATTGGCTGAACTAGCACGCAGAGGACTGCTCTTACCCATCAGTCTTCCTAAAGTTGTACCCGTTGTTGTAAAGGCTCTCCACTATGATATTCGAAGAGGTCCACATAGCGTTGGATCTCATATTCGTGATGCTGCCGCTTATGTTTGTTGGGCATTCGGTCGTGCGTACTATCACACAGACATGAAAAATATACTGGAACAGCTTGCTCCTCACCTTTTAACAATTGCCTGCTATGACCGTGAGGTAAATTGTAGAAGAGCGGCTGCGGCAGCTTTTCAGGAAAATGTTGGGAGACAAGGAAATTACCCTCATGGAATCGACATTGTGAATACAGCGGATTATTTTGCACTTTCTTCACGTGTAAATGCTTACCTTCATGTTGCTATCACCATAGCGCAATATGATGGGTACCTATATCCATTTATGGAGGAGCTTTTATATAACAAGATCTGTCATTGGGAAAAAGGGTTAAGAGAGCTTGCCTCAAATGCATTGTCAGTTCTTGTAAAGTATGATACTGATTATTCCGCAAATTTTGTACTGGGGAAGTTAATTCCATGCACTCTCTCATCTGATTTGTGCACGCGCCATGGTGCAACCTTGGCAGCTGGGGAAGTTGTATTCGCTCTGCATAGCTCTGGTTTTTCACTTCCAATAGATAAGCAGAAAGATATTGCTGGTGTAGTTCCTGCTATCGAGAAAGCAAGACTGTATCGTGGGAAGGGTGGGGAGATAATGCGTGCTGCAGTTTCACGCTTCATTGAGTGTATTTCTATTGCTCGCATATCTTTGACAGAAAAAATTAAGAAAAGTCTGCTTGATACCCTCAATGAGAATATGAGACACCCTAATAGTCAAATACAGACTGCTGCAATTGAAGCCTTCAAGCACTTCGTTCTGGCATACCTTAGCGAGAAAGACGACAAAAGTACCAATGATATCACATCGAGATGTCTGCAGCAGTTGACTGAAGCCAATGTAGCTGCAAGAAGGGGAGCAGCATTAGCAATAGGAGTTTTACCCTTAAAGTTTCTTGCCCCTAGGTGGAATGTTGTGCTCCCAAAACTTTGTAGATCTTGTGCAATTGAAGAGAACCCTGAAGACAGAGATGCTGAGGCACGGGTAAATGCTGTCAAAGGACTTGTATCAGTGTGTGAAACACTAACTGAGACAAGAGGATGTTCTGATTTAGAACCAGAGGACTACATATCTCTGTTCCAGATGATAAAAAATGAAGTCCTTCCAAGTTTATTGAATGCTTTGGAAGATTACTCTGTGGATAACAGAGGTGATGTAGGTTCTTGGGTTCGCGAGGCTGCAATGAATGGTCTTGAGAAATGTACATATATCCTATGTAAGAAAGACATTGCTGATCATGATCATGATCAGAAGCGGTCACTTTTTGATGCCCATACTGCAACAAGTTTAGTTGGTGGGCTGCTTAAGCAAGCAGTTGAAAAGATGGACAAATTGAGAGAAGCGGCTGCAAAGGTTCTCCAAAGGATTTTATACAATGAAGCTTTTCTTGTCCCTTTAATACCTTACAGGGAAAAGCTAGAAGAAATCATTCCCAACAAGTCAGACTTAAAGTGGGCAGTCCCCGCTGTTTCTTATCCCCGTTTTGTTCAGTTGCTTCAGTTTAGTTGTTACAGTAAATGTGTGTTGTCTGGGTTAGTCATTTCCATTGGTGGTTTACAAGATTTTCTGAAAAAGGCAGCACTCAGTGCTTTGGTAGAGTACCTTCAAGCCGCTGAAAGCAAAGATCATAAAAGTAATGCAAGAGAGTACAGCTTATCAAACGACATGCTTTGGGTTCTCAACAAGTATGCAAGATGTGATCGAGTCATAACACCCACTCTCAAGACCATTGAGATTTTGTTCAGCAAGAGGATCTTCTTACAGATGGAGGCCCAGACTGCTGTCTTTTGTGCCGGTGTTGTGGAATCTCTTGCTGTTGAGTTGAAAGGATCGAAGGACTTCTCCAAGTTATACGCTGGCATGGCAATACTTGGATATATTGCTTCAATTTCAGAGCCTATCAATATCAAGGCTTTCTCTCATCTTCTAACCTTCCTCAGCCATCGGTATCCCAAGATTCGAAAGGCTTCTGCCGAGCAAGTTTACCTCGTACTTATCCAAAACGGAGACCTCGTGGCTGACGAAAAACTAGAGCAAGCACTCGAAATCATGTCTGAATGTTGCTGGGAGGGCGATGTCGAGGAAGCAAAACGCCAAAGGTTAGAACTGTGTAGAGTAGCCAATATAGAGACATCAGCGACAGTTGGTAGGAACAGAACCGAAATTTCATCGATAGAATGGGAGAAAAAGCCTAGAGCTGGTGATGAAAATGCATCCTACTCTTCGTTAGTAGACTCGGCCGGGTTTTGA	3732	43.14	MATAAVAVAEEVDDEHDSKEAVLQRYFLQEWKLVKSILDDIVSHGRVSDLSSVSKIRSIMDKYQEQGQLLEPYLESIICPLMSIVLSKTIELGVESNELLEVISPLCIIIYSLVTVCGYKAVIRFFPHQVSDLELAVSLLEKCHCTSAGTALRQESTGEMETKCVILLWLCILVLIPFDMSSVDTSIANSERVVTNEPPPLVNRILEICKDYLSNAGPMRTIAGLLLSRLLTRPDMLHAFISFTEWANGVLSSSTEDVMHQFKLLGVVEALAAIFKTGSKKVLLDIVPVVWNDASVLIKSTTAARSPLLRKYLVKLTQRMGLNVLPHRPITWRYVGKHSALGENISANTSRTADQGSQVANSGLSFSDQNASEQEEDMDVPEIIEDIIELLLSGLKDTDTVVRWSAAKGIGRITSRLTYTLSEEVLLSVLELFSPGEGDGSWHGGCLALAELARRGLLLPISLPKVVPVVVKALHYDIRRGPHSVGSHIRDAAAYVCWAFGRAYYHTDMKNILEQLAPHLLTIACYDREVNCRRAAAAAFQENVGRQGNYPHGIDIVNTADYFALSSRVNAYLHVAITIAQYDGYLYPFMEELLYNKICHWEKGLRELASNALSVLVKYDTDYSANFVLGKLIPCTLSSDLCTRHGATLAAGEVVFALHSSGFSLPIDKQKDIAGVVPAIEKARLYRGKGGEIMRAAVSRFIECISIARISLTEKIKKSLLDTLNENMRHPNSQIQTAAIEAFKHFVLAYLSEKDDKSTNDITSRCLQQLTEANVAARRGAALAIGVLPLKFLAPRWNVVLPKLCRSCAIEENPEDRDAEARVNAVKGLVSVCETLTETRGCSDLEPEDYISLFQMIKNEVLPSLLNALEDYSVDNRGDVGSWVREAAMNGLEKCTYILCKKDIADHDHDQKRSLFDAHTATSLVGGLLKQAVEKMDKLREAAAKVLQRILYNEAFLVPLIPYREKLEEIIPNKSDLKWAVPAVSYPRFVQLLQFSCYSKCVLSGLVISIGGLQDFLKKAALSALVEYLQAAESKDHKSNAREYSLSNDMLWVLNKYARCDRVITPTLKTIEILFSKRIFLQMEAQTAVFCAGVVESLAVELKGSKDFSKLYAGMAILGYIASISEPINIKAFSHLLTFLSHRYPKIRKASAEQVYLVLIQNGDLVADEKLEQALEIMSECCWEGDVEEAKRQRLELCRVANIETSATVGRNRTEISSIEWEKKPRAGDENASYSSLVDSAGF	1243

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Nin6g00840	1243	ProSiteProfiles	HEAT repeat profile.	387	424	IPR021133	-
	Nin6g00840	1243	SUPERFAMILY	ARM repeat	198	1188	IPR016024	-
	Nin6g00840	1243	Coils	Coil	929	949	-	-
	Nin6g00840	1243	Gene3D	-	601	1058	IPR011989	-
	Nin6g00840	1243	MobiDBLite	consensus disorder prediction	347	375	-	-
	Nin6g00840	1243	Gene3D	-	267	549	IPR011989	-
	Nin6g00840	1243	PANTHER	BETA-TUBULIN COFACTOR D	10	1208	IPR033162	GO:0000226(PANTHER)\|GO:0005096(InterPro)\|GO:0005096(PANTHER)\|GO:0006457(PANTHER)\|GO:0007021(InterPro)\|GO:0007023(InterPro)\|GO:0048487(InterPro)\|GO:0048487(PANTHER)
	Nin6g00840	1243	Pfam	Tubulin folding cofactor D C terminal	923	1110	IPR022577	-
	Nin6g00840	1243	MobiDBLite	consensus disorder prediction	347	371	-	-
	Nin6g00840	1243	FunFam	Tubulin-folding cofactor D	566	1025	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Nin6g00840	K21767	tubulin-specific chaperone D

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Nin	Nin-Chr6:1920498	Nin6g00840	Nin-Chr6:9632512	dispersed