Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nin6g00884 | ATGCTGGAAATGGAATCAACAAAGCCACCACAAATCACCGAAATGTTTCAGAAATTCGCAATCGCATTCAAAGCCAAAACCTTCGAGTTCTTCGCCGAAGACGACGCCGACGCCACCTCCGCCGCCGCCACCGACACCGAGGACGGCTTCTCCCTCCTCGACTCCGCCGAAGACTTCATCCCCGACCAGAAAGTCATCATCATCAAACCCGACAACCCAATTCAACCCTTCAATCTCCAGTTCGGAGAGTACCTGATTTCCTCGCTATTCGCTACGGTCTCCTCGTTCGAGGCCTCGTATCTTCAGTTGCAGACGGCCCATGTCCCGTTCGATGAGGAAGGGATCAAGACGAGTGATCGAGCTTTGGTTTCGCAGCTTCGGAAAGTACATGATTTGAGGCAGTTGTATATGGATTCTCGGAAGAACCCTAATTTCAAAGCTGATTTCTCTGTTGGGTCTTGCCTCGAAGCTCGGGTACAGGAGAATCAGAACAAGCTTCGTGCGTTGGAGACTATGTTTAATCGATTACAGTCCGACATTGATGTTAAGGATGATAAGGTTTCGAGTTTGAGAAAGAGGTTGGGTGAAATCGAACAATCAAACTCGAAAATGTCGATGAAAATGTCGAGGATTTTGAAGAACGAATCGAATTCCCCAATTCCAACTGGGGTTTTGCTGACGATTCGGGTTTTTGATTCTATGTTGCGTGAAACTTGTCGATCCACCCATCGTTTTACTAAGTTGTTGATTGAGTTAATGAAGAGAGCTGGTTGGGATTTGGATTTAGCAGCTGATTTTGTTCATCCCAATGTTGAGTATGCGAAAATCGGGCATAAACGGTATGCATTCTTGTCTTATGTTTGTTTAGGTATGTTTCGAGGTTTTGATTCCGAAAGTTTCGGTTTGCTGGAAAACGATGAATCTCTGTGCAATGGTTGTGATAATAATGGTTTGAGTAAAAGGAAGAATGATTCTTTGAAGCAATTATTCGAACATGTGGCGGTCAATCCAGTGGAAACCTTGAATATAAACCCTACCTGTGCTTTTTCGAAATTCTGTGAATTAAAGTATGAAGAACTAGTGCACCCTACAATGGAATCGTCGTTGTTTCGGAATATGGATAGAAATGAAGCTGTTCTGGATTCGTGGAGATCGTTGAGTGTGTTCTACGAGGCGTTTGTTAATATGTCTAGCTCAATATGGTTACTTCATAAGCTGGCATATGCATTTGATCCTGCAGTTGAGATATTCCAGGTAGAACAAGGGGCGGATTTTTCGATGATTTACATGGAAGATGTTACGAAGAGAAGTGTATTGTTAGGCAAGAGCAGGCCAAAGGTCGGGTTTACAGTTGTACCAGGATTTAAGGTTGGAACAACAGTCATTCAATCCCAGGTCTATCTAACTTAA | 1410 | 43.76 | MLEMESTKPPQITEMFQKFAIAFKAKTFEFFAEDDADATSAAATDTEDGFSLLDSAEDFIPDQKVIIIKPDNPIQPFNLQFGEYLISSLFATVSSFEASYLQLQTAHVPFDEEGIKTSDRALVSQLRKVHDLRQLYMDSRKNPNFKADFSVGSCLEARVQENQNKLRALETMFNRLQSDIDVKDDKVSSLRKRLGEIEQSNSKMSMKMSRILKNESNSPIPTGVLLTIRVFDSMLRETCRSTHRFTKLLIELMKRAGWDLDLAADFVHPNVEYAKIGHKRYAFLSYVCLGMFRGFDSESFGLLENDESLCNGCDNNGLSKRKNDSLKQLFEHVAVNPVETLNINPTCAFSKFCELKYEELVHPTMESSLFRNMDRNEAVLDSWRSLSVFYEAFVNMSSSIWLLHKLAYAFDPAVEIFQVEQGADFSMIYMEDVTKRSVLLGKSRPKVGFTVVPGFKVGTTVIQSQVYLT | 469 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nin6g00884 | 469 | Coils | Coil | 159 | 179 | - | - | |
| Nin6g00884 | 469 | Pfam | Plant protein of unknown function (DUF641) | 80 | 206 | IPR006943 | - | |
| Nin6g00884 | 469 | PANTHER | PROTEIN GRAVITROPIC IN THE LIGHT 1 | 14 | 468 | IPR040225 | GO:0009639(InterPro)|GO:0009959(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nin6g00884 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nin | Nin-Chr3:10399352 | Nin6g00884 | Nin-Chr6:10245005 | dispersed | |
| Nin | Nin-Chr6:10245005 | Nin8g00566 | Nin-Chr8:13132725 | dispersed |