Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nin6g00898 | ATGTTTGATCAATCATCTTCAAGAAATGCTGTACCAGAGTGGCTAGAGTCACTATTGTGTGAGAAATTCTTCAATGCTTGCATAATTCATGAAGATGCAAAGAAGAATGAGAAGAACATCTTTTGTTTGGATTGCTGTGAAAGTATCTGCCCTCACTGCTTATCCCCACATAGATCTCATCGTCTCCTACAGGTAAGAAGGTATGTGTATCATGATGTGATTAGGCTTGGTGATGCTGAAAAACTGATGGATTGTTCTCATGTTCAAGGGTACACTACAAATAATGCAAAAGTGGTGTTCTTAAACCCAAGGCCACAGAACAGAGGAATTAGGAACTCAAACAACATCTGCATCACCTGTGACAGAGCTCTGCAAGACCCATACCTCTTTTGTTCAATTTCCTGCAAGGTCAACCACATACAGAAAAGCGGTGAGAATTTGTCCAACTACATGTACGATTGTGAGATTCTGACCCTGCCTGAACCGGGCTCGGATGACGGTTTAATGACGCCGGATTCTGTGCTCGAGCCGTTCGGTTCGTTGAGGACGTCCTCCGGTTCGAGTGGCACCAGCGGCGGCGAGGTGGGTTGCAGGACGGTGGGGTGCACGGCGGCGACGACAGATGTTGTGAGGAAGAAGCGTAGTACCTTGTCGGCAATTCGGTCGGCGGCGGCGGCGTGTAGGCCCGCCTTATACGCGCCGGTGTCGGAAGTTCCATCCCGGTGCCGGAAAGGCATGCCACGGCGGTCGCCGCTCCATTGA | 762 | 49.74 | MFDQSSSRNAVPEWLESLLCEKFFNACIIHEDAKKNEKNIFCLDCCESICPHCLSPHRSHRLLQVRRYVYHDVIRLGDAEKLMDCSHVQGYTTNNAKVVFLNPRPQNRGIRNSNNICITCDRALQDPYLFCSISCKVNHIQKSGENLSNYMYDCEILTLPEPGSDDGLMTPDSVLEPFGSLRTSSGSSGTSGGEVGCRTVGCTAATTDVVRKKRSTLSAIRSAAAACRPALYAPVSEVPSRCRKGMPRRSPLH | 253 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nin6g00898 | 253 | Pfam | PLATZ transcription factor | 66 | 137 | IPR006734 | - | |
| Nin6g00898 | 253 | ProSiteProfiles | Zinc finger B-box type profile. | 27 | 65 | IPR000315 | GO:0008270(InterPro) | |
| Nin6g00898 | 253 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 6 | 252 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nin6g00898 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nin | Nin-Chr3:29103244 | Nin6g00898 | Nin-Chr6:10335611 | dispersed | |
| Nin | Nin-Chr4:41981918 | Nin6g00898 | Nin-Chr6:10335611 | dispersed | |
| Nin | Nin-Chr6:10335611 | Nin9g00026 | Nin-Chr9:315382 | dispersed |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Nin | PLATZ | 9.1e-27 | No_clan | TF | PLATZ |